| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_66620 |
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| Symbol | STP3 |
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| ID | 4851735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 2691748 |
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| End bp | 2694607 |
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| Gene Length | 2860 bp |
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| Protein Length | 644 aa |
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| Translation table | |
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| GC content | 39% |
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| IMG OID | 640393443 |
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| Product | zinc finger protein involved in pre-tRNA splicing |
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| Protein accession | XP_001386848 |
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| Protein GI | 126275426 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.859513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AATACATTGT TTATTTTATT TTTATTTGAT TACCTTCTTC AACCAACTGT CACCTGTCAC
AGCGGATAAA TTTAAGACTC ACCATAAAAT TTTTTCTTTC TTTTCAGGAA TTTATGAAAT
TTACATAACC TTTTCACGGT ATTACTAAAC ATATATATAT AACGAAAGCT ATCCCGAGCG
ATTCAATCAA CGTCAGGCCA CCGATATTGT CAATAAATAT AAAGAGCCAA CACTATCGAA
TCCTTCCAGC TAGTCCGATT TGAAATCTCA TCCAAAAGCA AACCCCATCT CAGTCACGCA
CTTGACCGAA AAAACTATCT GACTGTATTT GTGACTGTTA TTTATATCTC CACTTTCCAA
GTACCGACAA ATTTATGTTG ATTTTCATGT CAAAGAACAC TTACCCAATA TTGATTTGTT
AAAAGCTGTT TATAAGAACG TTCTTCATTT TACGTGATAA TTCCATAGTA TCTACACAGC
AAACAAATGG TACAATGTTT TTTTTCTCTC TTGGTTTAAT TCATGACACA GCTAAGGCTA
CCTCTGGTAG CGGCAATAGC GCCAGTGCCG TTGCAACCAA AAGTTTCACC GCCCCAAATT
CCAAAACATT TGGTCTCTTA GCGACGAAGA ACTTATTGGG GTTAAAAGTC AATGTGTTCA
AATTTTTAAA CAATTTGATC TTCAAGGGCA CTACCAATCT TGATGCGAAC GGATTATTTC
CGCCATTATT TAAGTCGACA ATCGTTAACT TATCCAACCA AAAGAATCAG TGCAGATTAC
CAGTTAATTG CGCGGCCGAC GACTTGGAAT TAAGTTTGGG TGGTGCGAAC GACCAAATCG
AATTTTTCAA TAATATCATT CTTAACGGCG TGGGAGGAGT TTCCGATTTC AATTCGAGCT
CTGCACTCTC GAATACGCCT AACAGTGGGA ACTTTGGAAA CGGATCCAAC AATTTCTATG
GCACCGGACT CGACTCCAAC GAACTCCCAG AATTTGACGA TTTTTACGAG GCTCATAGCC
ACCACAACAC ACACACTCTC GGTGGGCACT CTAGTCAGTT TGGCAAGTTC AAGAATGAAG
GCGACGAGTT GTTTGCTGGC AAGTCTATGA ACTTCACTGT TCCATTACCT CAATCTTTCC
ATCACCACCA GATTGCTCAC AACCACCAGG AGTTCATCGA AGTCAACAAA GCTAACATTA
CGTTGATACC AAATGCTTCT CTTTCGTTGT CCAAAAGCTA CCTGAATTCC AACAATGGCT
CGTACCACAA CAGTGGCGAC GACTACTTGA AGCTGATGAA CGTCGTCGGT TTGTCTAACG
ACTCGCCATA CTTCAATGAC TTCATGCACA ATGAAGGAAG ACAAAGTCAG GCACAAGACG
ATTACTTTTC ATCGTCTGTT TCTTCCAGCG AAAGTTACAT CAGTCCTTTG GATGATGAAT
TTTTCAAGAA GTTCAATAGT GTTGAAAACA CTGATCAGTT GAGAATGAAC AGCACAACTA
GCTCATTCTC CAATGTGGAC GTTTTATTTG ATGACGAGGA CGATGTCTTT GCCGCAGTGG
ACGATTCTGC AAACAGAAAG AGAAAAATTG AATCCATCAG CTCTGGTTCA TCTGTTGCAT
CGGTAGTATC TGCTTACAAC ATGGATGAAG AGCAATTTTT GAACAATACC TCTTCCTCTT
TGCAAGCTTT GTATACTCAA GCTCAATCTA AAAATCTCTA CAAGATTCCT CCAAAGAAGT
ACAGAAAATC TTTCAGCAAG GAAAAGGTAG CTTCAAGGCA AGAGAAAAAA TCTAAATTGA
CTTCTACCTT GACCACCACC ACCAATCCTT CTCAAACCAA CGAACCAGTT GGATATGACA
CCCGCAATAA CAGTGTAGTA TCTTTGACTT CTACAATTAG TGAGCGCAGA AAGTCAGTCC
GTTCCGCAGC AGACCCTTCT TTGCCTCACG AATGTCCGCA CTGTGATGCA GCATTCAAAG
TGAAGGGTTA TTTGACTCGT CACTTGAAGA AGCATAGTCC AGCTAAGGCA TTCGTGTGCC
CATTCTTTCA AGAACCATGC GACGGAAACT CTGGAACTAA GTGCCATCCA ACAGGTGGTT
TCTCTCGTAG AGACACGTTT AAGACACACT TGAAAGCACT CCACTTCATC TACCCTCCAG
GCACTAAGTC TAATGAAAGA AGTAGTATCA GTGGTAGATG TGCTGGTTGC TTCATGTATT
TCGAGAATAA TTTTGTTTGG TTAGCTAGAC ATATTGAGTC TGGTGAATGC AAGGGTACAG
TACAACGCAA ATTACAAGCA CACAAAGAAC AAGTTGTTAC AAAGGAAGTT GAGGTCGTTA
AAGTTAAGAG TGAATACGAA GATACAGATT TGCTTAAAGA GGACTTTGAT GAATCGTCTC
ACTTTGTTAA AAAAGAATTA CTTGATTAAT CATTGTGTGT TCGACTTGAT ACAGCTGGTC
TGAATTCTTG AAACTTGTTG GTGCTACAAT TACAATTACT TCAAACAAGT TCCAAATTGC
ATATTTGTTT TTAGTTGTCC TGTTTGTTTG CTTTCCTTCA TCACTTGCAT AATTTCAATT
CATTGGGTGA GCAAAGGGTA TAGTTGATAT TACTCTTAAT TTCTCGACTC TGAAGAATGG
GTTCACTGTT CTTAATTTTT GGTGATTGCC TCGAACTGTT TAACCTTGGA TGTTTTTGAT
CCTATACTTT CATTTCGCTG TGAAAATATT TCCAAATGGT CTTGATTTGG ATATGTTCTG
AGAATTATTT CTATTTTACT TCATATGATG ACCTTTTCAT TTTTTATGTA TGATCTTTTC
AATATTTATT AATTTTAACA ATATATGGGT AATTTAAATT
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| Protein sequence | MFFFSLGLIH DTAKATSGSG NSASAVATKS FTAPNSKTFG LLATKNLLGL KVNVFKFLNN
LIFKGTTNLD ANGLFPPLFK STIVNLSNQK NQCRLPVNCA ADDLELSLGG ANDQIEFFNN
IILNGVGGVS DFNSSSALSN TPNSGNFGNG SNNFYGTGLD SNELPEFDDF YEAHSHHNTH
TLGGHSSQFG KFKNEGDELF AGKSMNFTVP LPQSFHHHQI AHNHQEFIEV NKANITLIPN
ASLSLSKSYL NSNNGSYHNS GDDYLKLMNV VGLSNDSPYF NDFMHNEGRQ SQAQDDYFSS
SVSSSESYIS PLDDEFFKKF NSVENTDQLR MNSTTSSFSN VDVLFDDEDD VFAAVDDSAN
RKRKIESISS GSSVASVVSA YNMDEEQFLN NTSSSLQALY TQAQSKNLYK IPPKKYRKSF
SKEKVASRQE KKSKLTSTLT TTTNPSQTNE PVGYDTRNNS VVSLTSTISE RRKSVRSAAD
PSLPHECPHC DAAFKVKGYL TRHLKKHSPA KAFVCPFFQE PCDGNSGTKC HPTGGFSRRD
TFKTHLKALH FIYPPGTKSN ERSSISGRCA GCFMYFENNF VWLARHIESG ECKGTVQRKL
QAHKEQVVTK EVEVVKVKSE YEDTDLLKED FDESSHFVKK ELLD
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