| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_66589 |
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| Symbol | CAP1 |
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| ID | 4851665 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 2487570 |
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| End bp | 2489833 |
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| Gene Length | 2264 bp |
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| Protein Length | 492 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640393373 |
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| Product | transcriptional activator involved in oxidative stress response |
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| Protein accession | XP_001387049 |
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| Protein GI | 126275202 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CCTTAATCTA TAGCTATCCG GCCAATTGTT CTTCGGACAA GTAGTGCCGT TCTTTCAATT
GTATATTCGA CACCTCCACT GCTGTGTTCG TGTCTCCATC CTAAGCTGTC TAGACGTTAT
AACCGACGCG TTCACCCGTC TAAGCTCCGT CCCAGTCTCT CCATAAATCG TGTCCCAAAT
ATTTGGCACC TGCAAGCATC CCTCCTGCAG ATAGATCCAC AGTCTCCAGA CTTTTTTCTG
TAGCCTTCCA CAGATAAAAA GAAATTTGTA CCAGTATCGT ACGCAGGATC CAGAAGTTAC
CCGCACGCCG TCTTTATTGA TTACTAATAT CTGTGCTAGA ATAGTGAAAT ATATCACTAG
AGCATCTCCA AAAGCAGTTT TTCACACGTC TAGTTACTCG TGTTAGCTAC TTTTCGTGTT
TCTATTTCAA CCAACAATCT TTGTAAACTC ACCAGCATGA ACGACGTGAA GAGAAATTAC
GCTGAGGTTC TATCCTCAGA GTCGCCCATG GGGTCTACAC CAGACGCACA TGACGACAAG
AAGTTACATA CCAAGCCTGG CAGAAAGCCG ATAGAGACAG AGCCGAAGTC CAAGAGAACG
GCCCAAAACA GAGCTGCTCA GCGTGCTTAT AGAGAACGTA AGGAACGTAA AATGAAGGAC
TTGGAAGACA AGGTTAAGTC GCTAGAAGAC GAAAACATCA AGGCTACAAC AGAAGCAGAC
TTCTTGAAAG CTCAGGTGGA TATGTTAAAG AATGAGTTAG CCAGATACAG AGGCCACACA
GATTTCTCGG ACTTGAATCT ACCTACTAAG GTAGGAAATT TGTCGAATCC AAACACATCC
AAGTCTGGCA GCTACAATTT CAATTCGGCT TCATCCACAG CATCTTCGGC CAAATCTGCT
AATTCTGTAC AACACACATC TACATCTTCG TCTTTAAATG ATAATTCTCC ACGTCAGTTC
TCTGTGGACT TTCCATGGTC CAAGGATAAC TTGATGAGTC TCAAGAGCGG TACAAACGTA
GCCAGCCTGG AGTATAATGC CAACCAGCAG GTTCCAGATT TGGTGAGCGG CTCTTCCTCA
TCTACTTCGC CTTTAAATGA TAACCTCTTG GTTTCGCCAG ATTCGTCTGT ATCCTCAGCT
TCTAATCCAA TTAACGTCAA CACAAACTTG GACTTCACAT CGTCTTTTGA CGAGCAGTTG
GATCCATTCT GTGTCAAGTT GAATGAAGCA TGTGGAACGA AGCAGTGCCC AGTTCCTAAG
ACTAAGAGAA ACGACTCGAG GGTCTCCCAG AGCTCGATAC CCAACCAGTT CAGCTCGCCA
TTCTCTAACT TGGTAACACC AACTCCGCAG AACTTAAACG ACATTGACTA CTTGAGCGAT
CCGTTCTTCA ACCAAGTGGG AGATCCATTC TCTCTAGACT TGTCCAACAA CCAATCAGCA
TTATCAACCA ACACTTCCGT GGATTCCAGC AATAGCATAA ACAGCAACAG TACGGCTGTG
CCAGTTCGCT CAAATAACAC CAGCATAGCC ACTCCATCGC ATAACAACGA AGATCCATTG
TCGTTCCTTA ATGACAACAA TTTCGATGTG TCGTTGGCTT TTGGTGATCC AAACCCTAGG
CATGGTAAAG ATGAATTGGA CCCTATAGCA TTGTTGACTA CTGAAGAGTC GATCTATGAT
CCGTTGAAGG ATACTAGCGG AGTGAACGTG AACTTCAACT TCAACGACTT TGTCAAGAGC
TCCTTGCCCT CTGAGACAAC CCCCAAGGAA AGAAACTATA CTTTGACTGA ACCTTCTATC
AATGAAGAGG TTGCTGAAGA TGACGATGAT GATGCTGTGG TGCCGGCTCC TGAACAAACT
ATTAGATGCA GTGAAATTTG GGACAGAATC ACTGCTCATC CAAAGTATAC TGAGATTGAT
ATTGATGGTT TGTGTAACGA ATTGAAGAGT AAGGCTAAAT GCTCCGAAAA AGGCGTGGTG
ATTAATGCTG CCGACGTGAA TCAATTGTTG GAACAAAGCG CGATGAAGAG GCGTTGAACA
GTATATGTTA ATTATTAATG CCAATTCGAC ACGTTTAATG AGATTTTTTC AGTTCGGACC
TAAGTGATAT GTCATGTACC ATATTTTCAG ACTTTTTGTC GCAGCTTGAT TTTTAGTTCA
TGTTCGATAG CAGTGCTAGT AGACTTTTTT CATGGCACTT AATTTATTCA TATCCATATA
TATGGTATTT ACCTAGAGTT ATAAAAATAT AAAAACATCA ACTG
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| Protein sequence | MNDVKRNYAE VLSSESPMGS TPDAHDDKKL HTKPGRKPIE TEPKSKRTAQ NRAAQRAYRE
RKERKMKDLE DKVKSLEDEN IKATTEADFL KAQVDMLKNE LARYRGHTDF SDLNLPTKVG
NLSNPNTSKS GSYNFNSASS TASSAKSANS VQHTSTSSSL NDNSPRQFSV DFPWSKDNLM
SLKSGTNVAS LEYNANQQVP DLVSGSSSST SPLNDNLLVS PDSSVSSASN PINVNTNLDF
TSSFDEQLDP FCVKLNEACG TKQCPVPKTK RNDSRVSQSS IPNQFSSPFS NLVTPTPQNL
NDIDYLSDPF FNQVGDPFSL DFNTTPSHNN EDPLSFLNDN NFDVSLAFGD PNPRHGKDEL
DPIALLTTEE SIYDPLKDTS GVNVNFNFND FVKSSLPSET TPKERNYTLT EPSINEEVAE
DDDDDAVVPA PEQTIRCSEI WDRITAHPKY TEIDIDGLCN ELKSKAKCSE KGVVINAADV
NQLLEQSAMK RR
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