Gene PICST_66483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_66483 
Symbol 
ID4851401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp1723361 
End bp1725045 
Gene Length1685 bp 
Protein Length508 aa 
Translation table 
GC content44% 
IMG OID640393109 
Productpredicted protein 
Protein accessionXP_001387558 
Protein GI126274500 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCAA TTCTATTATG GCTCACGTCT GCCAAAGCAC ATCCAGTCGA CTTTGACTCG 
CCCAATGAAC GACCACCGTA CAATCGAGAG GATCCGATCA ACGAAGCGAT GCTTATAGCG
TTTTTTGTGT CGATTGGAAT CTTCTTGCTC TTCACGGCTC TGGCTATCAT ATTCGTCGTA
GTAAGGCGAA AACTCGGCTT GTCGGAAGAT GACCTCATGA GAGAAGAAGA GAACCAGGCA
TACTTGGAAC TCAACTCTGA TGAACAGGAA CTCTTTTTCC AAAGCAAAGA CTACCTCCAG
TCTAATCCTT ATTTCCGCGG AGAGCTTACT CTTTCTCAGA ATCTTCTGAT TCAGGAAAAA
GGCGTGAATG CATTTGAGTT TCAAAAGGAT ATCATGCTCA CTAATAACGA TCTTATGATC
ATCAACAAAA CCGAGCTCAA TTTCTTCAAG ACCTTCGAAT GCCTGACGGT GACGAACTTG
CCTGTTCCCA TGAAAAACGA GGTGTACTAC TTCGAAAGTA AAATCTACTC ATTGCCAGAT
CCTGACAACA CCGTGATCTC TGTAGGATTA GGCGTAAAAC CTTACCCCTG GTTCCGTTTA
CCCGGGAGAC ACTTGCATTC CATCTGCTAC GATTCGACAG GCTATAGACG GTTCAACCAA
CCATTTAAGT TTAGTGGCGA ACCTCCTTTC CCCAAAATTA TCGAAGGGGA TGTCATTGGA
GTAGGCTACA GAGTCAGAAG TGGAACTGTC TTCTTTACTA GAAATGGTAA AAAAGTGAGC
GAATCAAAGC TAGGTGGCCA TATTCGTAAT TTTAAGATCG CCCATCAGGG CCAGATATAC
CCCATTGTTG GTGCTAACAA CTTGTGCTCT GTTCACGTGA ACTTAGGCCA ATGTGGGTTT
GTGTTTATAG AAGGCAATGT AAAAAGCTGG GGATATGCTC CGTTAGAAGG AACTGGACCT
GCTCCTCCGG CTTACAACAA GTTCAATGCT GACATCTTGT TAGAGCGTTC AGAGATAGAC
GATGACAACG ACTTGAGTGA ACGTGAAGAC GATTTCCCAC CAGACTTTTG GGAAGTCCAT
GGTCGTGATG CAGATGGTAA TACAGACGTA GAAGTGGGAA GTAGCAGTGG ACTCATGGAC
CAGGACAAGT TTAGCTACAA TGCTTACAGC GACGTGAATT CTAACGACGA GAGAATCACG
TTGGACAGCT TAGCACCTCC TAATAGACCA CCTTCGTATA GTAGCGAAGA GGATGAAGAT
GTTTCGCAGG ACATGGACAC AACGATCGAA GAAGGAGATA CGATATTCGA GGATCCCTTG
AACGAAATGG AGGTTAGCGA AGAGGACAGA AGCAGCAATG TTCATGTAGA CGCTGTTCTA
GAACACTCTG AGAGCAACGA AGAAGTAGAA GAAGTAGTGC TGGAAGAAGA AGGGCAAGAA
GTAGAGGTAC AAGAAGATGA AGCAGAACAA GAAACAGAGG AAGAAGTTGC AGGAGAAGCT
GATCATGACA GATCTCCAGA TGTATGATAC CGTTGCATTC ATCTCTTCAG TTCGTAAAGG
TAATACTTGC ACTTGCATAT TTTTTTGGGT TCATTCCAGG TAATAGACTT CGTTTTCATC
ACGAAAACAT TACCTAACGT TTTTAGTTCT TATAGATCGA TTAGTACAAT ATTAGTGATT
TTCAG
 
Protein sequence
MISILLWLTS AKAHPVDFDS PNERPPYNRE DPINEAMLIA FFVSIGIFLL FTALAIIFVV 
VRRKLGLSED DLMREEENQA YLELNSDEQE LFFQSKDYLQ SNPYFRGELT LSQNLLIQEK
GVNAFEFQKD IMLTNNDLMI INKTELNFFK TFECLTVTNL PVPMKNEVYY FESKIYSLPD
PDNTVISVGL GVKPYPWFRL PGRHLHSICY DSTGYRRFNQ PFKFSGEPPF PKIIEGDVIG
VGYRVRSGTV FFTRNGKKVS ESKLGGHIRN FKIAHQGQIY PIVGANNLCS VHVNLGQCGF
VFIEGNVKSW GYAPLEGTGP APPAYNKFNA DILLERSEID DDNDLSERED DFPPDFWEVH
GRDADGNTDV EVGSSSGLMD QDKFSYNAYS DVNSNDERIT LDSLAPPNRP PSYSSEEDED
VSQDMDTTIE EGDTIFEDPL NEMEVSEEDR SSNVHVDAVL EHSESNEEVE EVVLEEEGQE
VEVQEDEAEQ ETEEEVAGEA DHDRSPDV