Gene PICST_66044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_66044 
Symbol 
ID4840776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp244327 
End bp244865 
Gene Length539 bp 
Protein Length162 aa 
Translation table12 
GC content38% 
IMG OID640392091 
Productpredicted protein 
Protein accessionXP_001386066 
Protein GI126139087 
COG category[S] Function unknown 
COG ID[COG4702] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.148486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACACG AAATCTACAG TTACACTTTA GAACAACTTG ACGAATTAGA AGGTAGCAAG 
ATTACTTTGC CTGAGTTTAA TACCGAAATA GCTTGGAAAA TTGGAAGCTA TGCTAGGGAA
CAATCTCTTG TAAAGTTCCC CAACAAAGCA ATCGTAATCG ATATTCAATT AGCGTCTGGA
CAAGTATTAT TTCACACTTC AACAGGTGCC GGAGCTACCG TCGATAACGA CAAATGGGTG
GAGAGAAAGG TTAACGTGGT TAACAGGTTT GGAAAGTCCA GTTTCTTCGT TGGTCAAAAG
CTCAGAATCA AGAAGAAGCC TATCGAGGAG GCATTTTTGA TTTCCTCACT TGAATTTGCA
ACTCACGGTG GTTGTGTTCC CATTAGAATA AAAAATCTTG ACAGTGTAGT TGGTACCTTG
ACAATTAGTG GCTTGGCTCA AGAAGAGGAC CATTTATTTG CTTTGCAAGT ATTAGAAAAT
TTTGCTTAGT CAACCTCTAA AAATCAGACA AATGAAAAGA ATAAAATATC CTACTTTGT
 
Protein sequence
MPHEIYSYTL EQLDELEGSK ITLPEFNTEI AWKIGSYARE QSLVKFPNKA IVIDIQLASG 
QVLFHTSTGA GATVDNDKWV ERKVNVVNRF GKSSFFVGQK LRIKKKPIEE AFLISSLEFA
THGGCVPIRI KNLDSVVGTL TISGLAQEED HLFALQVLEN FA