Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_66044 |
Symbol | |
ID | 4840776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | + |
Start bp | 244327 |
End bp | 244865 |
Gene Length | 539 bp |
Protein Length | 162 aa |
Translation table | 12 |
GC content | 38% |
IMG OID | 640392091 |
Product | predicted protein |
Protein accession | XP_001386066 |
Protein GI | 126139087 |
COG category | [S] Function unknown |
COG ID | [COG4702] Uncharacterized conserved protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.148486 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACACG AAATCTACAG TTACACTTTA GAACAACTTG ACGAATTAGA AGGTAGCAAG ATTACTTTGC CTGAGTTTAA TACCGAAATA GCTTGGAAAA TTGGAAGCTA TGCTAGGGAA CAATCTCTTG TAAAGTTCCC CAACAAAGCA ATCGTAATCG ATATTCAATT AGCGTCTGGA CAAGTATTAT TTCACACTTC AACAGGTGCC GGAGCTACCG TCGATAACGA CAAATGGGTG GAGAGAAAGG TTAACGTGGT TAACAGGTTT GGAAAGTCCA GTTTCTTCGT TGGTCAAAAG CTCAGAATCA AGAAGAAGCC TATCGAGGAG GCATTTTTGA TTTCCTCACT TGAATTTGCA ACTCACGGTG GTTGTGTTCC CATTAGAATA AAAAATCTTG ACAGTGTAGT TGGTACCTTG ACAATTAGTG GCTTGGCTCA AGAAGAGGAC CATTTATTTG CTTTGCAAGT ATTAGAAAAT TTTGCTTAGT CAACCTCTAA AAATCAGACA AATGAAAAGA ATAAAATATC CTACTTTGT
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Protein sequence | MPHEIYSYTL EQLDELEGSK ITLPEFNTEI AWKIGSYARE QSLVKFPNKA IVIDIQLASG QVLFHTSTGA GATVDNDKWV ERKVNVVNRF GKSSFFVGQK LRIKKKPIEE AFLISSLEFA THGGCVPIRI KNLDSVVGTL TISGLAQEED HLFALQVLEN FA
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