| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_65683 |
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| Symbol | UTP21 |
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| ID | 4838834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 1712278 |
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| End bp | 1715208 |
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| Gene Length | 2931 bp |
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| Protein Length | 951 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640390149 |
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| Product | U3 snoRNP protein |
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| Protein accession | XP_001384636 |
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| Protein GI | 126136224 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGAAC CCGTAGATAA GAAGAGGAAG GTTTTGGATG CAGATAGTTC GATCTCAGTC
TTGCCTGGCT CAAAAACGGT ACAGAAGCCA AAACCATCCA AGATTTTCAG TCCTTTCAGA
GTTCTAGGAA ATGTTACGAA CGAGGTTCCA TTTGCTGTAG GAACGTTAGG GTCAACTTTT
TACATTGTAA CTTCCGTGGG AAGATCTTTC CAAATATATG ATGCTGCTAC TTTGCATCTT
TTGTTTGTTT CACAATCGCA GACTCCTGCC AAGATTACCT GTTTGGAAGC ACATCACCAT
TATGTTTATG CTGGATTTGG AAACAAGATT GGAATTTTCA AGAGAGGCAG ATTGGAGCAT
ACTTTGGAAT GTACAACCAG TGCTAGTGTG ACACATGTAT TATCTTTTGG TGATTATGTC
ATAGCTGCTG CTTCAGATGG AGAAATTTCT GTCTTTAAGA AGTTACCGGG AGCAAAGTAT
GCAAATTCGT TGTACACCAT CTTGAAAGCC ATTAACGCTG CCATTGAGGG TGAAATCGTC
GGTTTGATTC ATCCACCTAC TTATTTGAAC AAAATTGTGG TTTCTACGAC TTCTGGGTTA
TTCATCTTCA ATGTTCGTAC TGGAAAGCTT CTATTCAGAT CTCCAGCTAG TCAATTCACA
GAAGCGATTT CTTGTATTGA GGCTGCTCCC GTCTTGGATA TCATTGCTGT AGGAACTACT
ACTGGTAGTG TCTATTTGTA TAATTTGAAA AAGGGCAAGA TTTTGGGACA GAAAATCGTC
ACAGCTGCCG AAGACGCTTC GGCCAAAGTC GTTTCGTTAT CTTTCAGAAC TGATGGCTCG
CCTCATTTAG TAGCGGGCTT GAACACAGGA GACTTGTTCT TCTACGACTT GGCCAAGAAA
GCTAGAGTCC ATGTGTTAAG GCATGCTCAT AAAGAAACCC ACGGAGGTAT TTCCAACGCC
AAATTCTTGA ATGGACAGCC TATTGTAGTC AGTAATGGTG GTGACAACCA TTTGAAAGAA
TATGTATTTG ACCCTACATT GTCGACTTCT AACTCATCTA TTGTTTCTCC TCCACGTCAC
TTGAGATCCA GAGGAGGACA TTCTGCCCCA CCCGTAACTA TTGAGTTTCC TGACGAAGAA
AAATCTCACT TTATCTACAG TGCATCAGGT GATAGATCAT TTTGGTCCTT CTCGTTGAGA
AAGGATGCTC AGGCTCAAGA AATGTCTCAG AGACCGCAGA AGCAAAAGAA CGGGAAGAGA
CAGGCTGGTC AGGTTCAGTC CATGAAGGAA AAATTCAACG AAATTATCGC AATCTCATCG
TCTCAGACTC GTGAAGGCGA TTGGGAGAAT ATCTTGACAG CTCACAAGGA TGAGCCTTTT
GCCAGAACTT GGGAATCAAA GAACAAGAGA GTGGGTAGAT TCAATTTGAA CACTATCGAC
AATGGAATGG TCAAATCTGT TTGCATTTCT CATTGTGGTA ACTTCGGTTT GGTAGGTTCT
GCTCAAGGTG GTATTGGAGT GTACAATTTG CAATCAGGAT TGCTTCGTAA GAAGTACGTT
TTGCACAAAA AGGCTGTGAC CGGTTTATCT ATTGATGGCA TGAATAGGAA AATGGTTAGT
TGTGGTTTGG ACGGAATCAT TGGCTTCTAC GATTTTAGTC AGTCCAAGTA CTTGGGAAAG
TTGCAATTGG AAGCTCCTAT TACCAGTATG GTTTATCACA AATCTTCGGA CTTGATTGCC
TGTGCGTTAG ACGACTTGAG TATTGTCATT ATCGATGTCA CCACTCAAAA GGTTGTCAGA
GTCTTGATTG GGCACACTAA CAGAATCACT AGTTTGGATT TCTCTCCAGA TGGTAGATGG
ATTGTGTCTG TTGGTTTGGA TGCAACAATG AGAACTTGGG ATTTGCCTAC TGGTGGATGT
ATCGATGGTG TCAGATTACC TGTTGTTGCA ACGGGGATCA AGTTTTCCCC AATTGGTGAT
GTCTTGGCCA CCACCCATGT TTCTGGAAAT GGGATTTCAT TATGGACTAA TCGTGCCCAG
TTCAGACCCA TTTCTACCAG ACACGTCGAA GAGGAAGATT TTGCAACTAT ATTATTGCCA
ACGGCCTCTG GAGATGGTGG ATCATCCATG TTGGATGGTG CTCTAGAGGG AGATACCGAT
GAGGATGACG TTCTTGCGCA AACATACACC ACTTTGGACC AAATAGACGA ATCGCTTATC
ACCTTGTCCT TGGGAGCCAG AAGCAAATTC AGCAACTTGG TTCACTTGGA TGTCATCAAA
CAAAGAAGCA AACCCAAGGA AGCTCCAAAG AAACCAGAAA ATGCTCCTTT CTTCTTGTCT
TTGTCTGGAC AAGCTGTTGG AGACCAAGCT TCTGTAGCTG AAGGGAAGCC AGGTCAATCT
TCTGCAGACA ATAATGATGA TACAGCCGAG GGTAGATTAC ATAAATTGAA GTCAGACCAA
GGACACAACT TTGAGTCTAA ATTCACTACA TTATTAAGAG AAGGTTCTAG TAACGGTGAT
TACTCAGAGT TTTTGAAGTT CTTGGTTGGT GCTTCTCCTT CTCTTGTCGA TTTGGAAATC
AGATCATTGA ACTCATTCCC TCCCTTGAAT GAAATGGCCA ATTTTGTTGA AGCTCTTAAC
CAGGGTCTCA AGTCTAACAC CAATTTCGAT TTATATCAGG CTTTCTTCTC CATGTATTTA
AAGAGCCACG GTGATGTCAT TCACAACAAT GCAGACGAGC AGAGATTGAA TTCGGCCCTT
GAGCAATGGA GTGAATTGGA TAGACAAAAA GGAGAAAAGT TAGACGAGCT TGTTAAGTAC
TGTTCTGGAG TGATCAGTTT CTTGAGCACT GTTTAGGTAT TATTGCACAT TAAAGATATA
TATGTATTTA TTTCGTATAA TCATAGAGAT GAAAAATAGA CCACGATCTA A
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| Protein sequence | MVEPVDKKRK VLDADSSISV LPGSKTVQKP KPSKIFSPFR VLGNVTNEVP FAVGTLGSTF
YIVTSVGRSF QIYDAATLHL LFVSQSQTPA KITCLEAHHH YVYAGFGNKI GIFKRGRLEH
TLECTTSASV THVLSFGDYV IAAASDGEIS VFKKLPGAKY ANSLYTILKA INAAIEGEIV
GLIHPPTYLN KIVVSTTSGL FIFNVRTGKL LFRSPASQFT EAISCIEAAP VLDIIAVGTT
TGSVYLYNLK KGKILGQKIV TAAEDASAKV VSLSFRTDGS PHLVAGLNTG DLFFYDLAKK
ARVHVLRHAH KETHGGISNA KFLNGQPIVV SNGGDNHLKE YVFDPTLSTS NSSIVSPPRH
LRSRGGHSAP PVTIEFPDEE KSHFIYSASG DRSFWSFSLR KDAQAQEMSQ RPQKQKNGKR
QAGQVQSMKE KFNEIIAISS SQTREGDWEN ILTAHKDEPF ARTWESKNKR VGRFNLNTID
NGMVKSVCIS HCGNFGLVGS AQGGIGVYNL QSGLLRKKYV LHKKAVTGLS IDGMNRKMVS
CGLDGIIGFY DFSQSKYLGK LQLEAPITSM VYHKSSDLIA CALDDLSIVI IDVTTQKVVR
VLIGHTNRIT SLDFSPDGRW IVSVGLDATM RTWDLPTGGC IDGVRLPVVA TGIKFSPIGD
VLATTHVSGN GISLWTNRAQ FRPISTRHVE EEDFATILLP TASGDGGSSM LDGALEGDTD
EDDVLAQTYT TLDQIDESLI TLSLGARSKF SNLVHLDVIK QRSKPKEAPK KPENAPFFLS
LSGQAVGDQA SVAEGKPGQS SADNNDDTAE GRLHKLKSDQ GHNFESKFTT LLREGSSNGD
YSEFLKFLVG ASPSLVDLEI RSLNSFPPLN EMANFVEALN QGLKSNTNFD LYQAFFSMYL
KSHGDVIHNN ADEQRLNSAL EQWSELDRQK GEKLDELVKY CSGVISFLST V
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