Gene PICST_65151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_65151 
Symbol 
ID4836697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp649199 
End bp651865 
Gene Length2667 bp 
Protein Length871 aa 
Translation table12 
GC content42% 
IMG OID640388012 
Productpredicted protein 
Protein accessionXP_001382363 
Protein GI150863772 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACAA TACTGACGGT GTCTCACATC ACCGCTGATA CCAAGCATCC GTTGGTGATG 
CTCACTAGTA GAGAAGGGTA TAAATATCTC TTTGGAAAAG TTCCAGAAGG CACCCAAAGG
GTTTTGAACG AAAACAAGTT CAAACTCGCC AAGTTGAAGT CACTCTTCTT GACAGGAACT
TTGTCGTCCT GGTCGGATAT CGGTGGACTT CCCGGTCTCT TTTTGACGTT GAGCGATTCT
TCCAAGAAGG GTATCGATGT CTTCACCAAT TCCAAGCTGC TCTTGTCGTA TGTCGTCAGC
ACATGGAGAT GCTTTGTCTT TCGTAAAGGT GCAGAATTGA AGCTCTTTGA CACTAATGAA
GAGAATATCA TCGGGGACAA CAATCTCGTC ATCAGACCTA TAAAAATAGC CAGTAACGTA
GAGAACATAA ATCAAGATTC AGCTGTCGCA AAACGCTTAG CTGTACAAAT GAAGAAGCTT
GTGTCTCTAA TGTTCCCTAA GGATACCAGT AAAGTCAACG ATAGAGATCC CAACTCTTAC
AAGTCAGACC CTACAGAAAC AGATATCCAC ACGCATGTCA GGATTCCAGA ACCACAAGCT
CTTCTCCCAA CAGCACAACA ACTGGCTGTA AGCTACTTAG TCAGGTTCTT GCCTATTCGG
GGAAAGTTTG ATCCGGTAAA AGCTAAAAGT TTAGGCTTAC AGCCAGGTGC AAACTATAGA
AAATTGAGTC AGGGTGTAGC TGTAGAAAAT GATCAAGGAG TTCTTATTCA ACCACAACAA
GTAGTTGCCG ACCCCAAAAC GTTTCCCAAG CTTCTTATTT TGGATATCCC CAACAAGTCG
TACTTGGATA ATTCTCTTGG TAGCGACAAG TGGTTTGAAA AGAATGATGA TTTAGGTGAA
GAAGAGGTAG GTATCGTCTA TCACTTTTTG GGAGATGATG TGGATTTTGA AACTCCTGCT
TACCAAGATT TCATAGCCAA GTTTCCTCGT GATTCAAAAC ATATAATCAG CCATCCAAAG
TTGGCGAACA ACACGTTGGT ATTCAAGAGA TCGGCTATAG ATGTTTTGAC TCTCAAATGT
ATCATGAAGG ACAACTTCAA CTTGCCCCAC ATAGAACCTT ATGAATCGTT ACCTGAAGGC
TCGGTCTTCA AGTTGCATCA GTTACAGCAA TTTCATGTAC AATCTCTGGG TGTAGAAGTT
GACACTTCGT TGATTCAAAG CGATAGTTGG GAAAGCATAT ATAACGAGAA TATTGCTGGG
TTGAACTTAC CAGATGTTAA CCTCGGTGAT ATTGTTGATT CTGAGCCAAG TACGTTGGAT
GCCCTTTCAG GCTCTCTCAA AGATCAGGTT CATATAGTCA CTTTGGGAAC TGGTTCAGCC
TTGCCCTCGT TGCATCGTAA TGTCATTTCA ACTTTAGTTA GAATCCCGTA CCATTCTTCT
CAAGGAGATA TCAGATTCAA CTCTATTTTG TTGGATGGTG GTGAAAACAC TTTGGGTACT
TTTCTGAGAA ACTTTGGCCA CAATATGGGT GAACAAGCTA GAAAGGTAAT GAAAGAGTTG
TCGTTGATTT ATTTGAGCCA TTTGCATGCC GATCACCATT TAGGAATTGT GTCTGTTATC
AACGAATGGT TCTTAGTTAA CAATGAAGAC CACAGAAAGC TTTACTTGAT TGTTCCATGG
CAGTACGAAA CGTTTATCTC TGAGTGGTAT AAGCTTGAAG GTCAGTTGAA TGATCTGGTA
AATTTGGACA GAATTGAATT CTTGAGTTGT GAAGACTTTT TACCAGACAG ACTACCCAAG
TACCATAAGA TCGATATCGA TGACTTTGAG TATCTCTATG ATAATAACGA TCTCAATCGT
ATTGTTGCCA AGTCTCCTTT GGAACCATTG AACAGATCGG CTATAAGCCG GCTCTTCGCT
GATCTCAGGA TCAAAGAAAT TGCTACAGTC AGAGCTCTTC ATTGTGCCTG GGCGTATTCG
GTCAGTATTA CGTTTGATCT AGAAGATAAT GAGTCGTTCA AGGTTTCGTA TTCTGGAGAC
ACTCGTCCCA ACCCCAAATT TGTCGATATC GGTCGCGATA GTGATCTTTT GATTCACGAG
TCTTCCTTGG ACAATGAGCT TATTGAGGAA GCCATTGCTA AGAAACACTC GACGATGATC
GAAGCAATCA ATGTGGCGCG CTACATGAAC TGTTCGAAAC TCATCTTGAC CCACTTCAGT
ACAAGATACT CGAACAAGAC TAATACGGTT CGAAACTCGG AAGCGTTGAT AGCCTTGTCG
CAGAGTTTAA ACAACTACTT GACCAAGTAC AGAGTGTCGC CCAACATTTT CGCCTTAGAG
GGCCAAGCGT ATCCCATCAA GTCGTACGAC GAGTTGGACA TCTGCTACGG CTACGACTTT
ATGAACTATA GGTTCAAGGA TCTTCATCTC CAGAAGCAGA AAATGGATTT GATCTACGAT
ACGTTTGAAG CGGAAGAAGA CGACGACAAG AAGGAGAGAG AAACGCTGAA ACAAAGAGAA
AAACAGGAGG TGAGAAGGAT GCAGCGCTTA CAGTCCAAAA ACAGTGTCCA CAAGAAGAGA
AAAGTCAGTG GCAGCGAAGA TGAAGAGGAC CAGTAGATAT ATATAGTAAT CCAAATTAAT
AGAGTCTTGT ACATAAACGT GGCTAAT
 
Protein sequence
MFTISTVSHI TADTKHPLVM LTSREGYKYL FGKVPEGTQR VLNENKFKLA KLKSLFLTGT 
LSSWSDIGGL PGLFLTLSDS SKKGIDVFTN SKSLLSYVVS TWRCFVFRKG AELKLFDTNE
ENIIGDNNLV IRPIKIASNV ENINQDSAVA KRLAVQMKKL VSLMFPKDTS KVNDRDPNSY
KSDPTETDIH THVRIPEPQA LLPTAQQSAV SYLVRFLPIR GKFDPVKAKS LGLQPGANYR
KLSQGVAVEN DQGVLIQPQQ VVADPKTFPK LLILDIPNKS YLDNSLGSDK WFEKNDDLGE
EEVGIVYHFL GDDVDFETPA YQDFIAKFPR DSKHIISHPK LANNTLVFKR SAIDVLTLKC
IMKDNFNLPH IEPYESLPEG SVFKLHQLQQ FHVQSSGVEV DTSLIQSDSW ESIYNENIAG
LNLPDVNLGD IVDSEPSTLD ALSGSLKDQV HIVTLGTGSA LPSLHRNVIS TLVRIPYHSS
QGDIRFNSIL LDGGENTLGT FSRNFGHNMG EQARKVMKEL SLIYLSHLHA DHHLGIVSVI
NEWFLVNNED HRKLYLIVPW QYETFISEWY KLEGQLNDSV NLDRIEFLSC EDFLPDRLPK
YHKIDIDDFE YLYDNNDLNR IVAKSPLEPL NRSAISRLFA DLRIKEIATV RALHCAWAYS
VSITFDLEDN ESFKVSYSGD TRPNPKFVDI GRDSDLLIHE SSLDNELIEE AIAKKHSTMI
EAINVARYMN CSKLILTHFS TRYSNKTNTV RNSEALIALS QSLNNYLTKY RVSPNIFALE
GQAYPIKSYD ELDICYGYDF MNYRFKDLHL QKQKMDLIYD TFEAEEDDDK KERETSKQRE
KQEVRRMQRL QSKNSVHKKR KVSGSEDEED Q