| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_65071 |
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| Symbol | FAA4 |
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| ID | 4851974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 3335280 |
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| End bp | 3338142 |
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| Gene Length | 2863 bp |
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| Protein Length | 699 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 640393682 |
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| Product | long-chain fatty acid--CoA ligase and synthetase 4 |
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| Protein accession | XP_001386962 |
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| Protein GI | 126276185 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.418644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.491736 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CAAAGAAGAG CAGCGCTCGG TTGCGGTTGG TCCAGAGCCA ATTGACTAAG CACAAAACGA
CAATTGCATT GGTACGAGAA GTTCAGCCTA CTGTACGATT CAGCTTCAGA CTCATTAGCC
CAGTACTGAA ACGCAATTGA CAGATCAGAC TGCCGTACAA AAAGTTCACT CTGCTGGAAT
TGCAAAATCA GTGATCTCCC TTAGCATAGC AAAAAAAGGC ACCAAAAGTC ATACAAAAAG
ACGGTAATTG CCACCTGCTC TAATTGTTTT TTCGGTGTTA CAACTCACTT TCGATTTTCG
TCAATTCACC ACCAAACGGA GATTTTGCAC AAGTGTTATT GTTTGTGAAT CTTCCCCTCC
GAGATCTCAC TACTGAAGTT GCCACTGTTT CCTTAATTAA GCACTGCGAC TTTTCTGAAT
CTCACTTTTC ACAGCTTCAC CACCTTCTTT TTTTGGGCCT CAGCTATCTT TTTTCTGGCT
CAGTCTCATT CTGGAAGTTT CCGACTGTAT TTTTTCCCAG ACATCCTAAA CACACTTGTT
TCTTTCCCTT TTCCACTAGT TAATCACCAC TAAATCATGG CCCCTCTTAC TGTGCCTGTG
GGCGAAGCCA AGCCGGGCGA AACGGCCCCC AGAAGAAAGA CCGCCAACAA GGCCGGTGCC
ATTTTCAGAC CCTCGGACTC TTCCGCTTTC ACCATGCCTG AGTTCTTCGA GGAATGTGTC
GCCAGACAAG GAAACAGAAA CGCCATGGCC TGGAGAACTT TGGTCGACAC GCACGTGGAG
ACAAAGAAAG TCCACAAGGT CATTGACGGC GTAGAAACGG AAGTGGACAA ACAATGGACC
TACTACGAAA TGTCGCCATA CACCCACATC ACCTATAACG ACTTGTTGGC TTTGGTCAAA
AACTACTCCA ACGGTTTGAT TGAGTTGGGT TTAGCGCCAA ACCAGCAATC TAAGTTGTTC
ATCTTTGCCT CTACTTCTCC CAAATGGATG CAATCGTTCT TGGGAGCTTC TTTCCAGAAC
ATCTCTATTG TCACAGCGTA CGATACGCTT GGTGAATCCG GTTTGACCCA TTCTTTGGTT
CAGACCGAAT CCGATGCTAT CTACACGGAA AACGCCTTGT TGTCCAACTT AATCAAGCCA
TTGTCCAAAA CAGACAAGGT TAAGTATATC ATCCATTCTG ATCCAATTGA CCCCGAAGAC
AAGAGAGCTG GAGGCAGTTT GTACAAACAG GCTCAAGCTT CCAAGGACAA GATTTTGGAA
ATCCACCCAG ACATCAAGTT CATTTCTTTT GATGAAGTTC TAGAATTGGG CAAAAACGCA
AAGACAAAGC ACGAGAATAT GCCAAAGCCC TCGGATTTGG CCTGTATCAT GTACACATCC
GGTTCCACAG GAGAACCAAA GGGTGTCGTC CTTACGCAAG AAAACGTTCT TGCAGCCGTT
GGAGGTATCA GTACAGTAGC CAACAGGGAT ATGGTCAAGA ACCACGACAG AGTCATTGCC
TTCTTGCCTT TGGCCCATAT CTTTGAGTTG GCTTTCGAGT CTGTTAATTT CTGGTGGGGT
AGTGAGTTGG GCTATGCCAA CGTAAAGACT TTAACTGATA CCTCATGTAG AAATTGTCAG
TCGGACTTGA TTGAATTGAA GCCTACAATT ATGGTGGGTG TTGCTGCCGT ATGGGAATCC
GTCAGAAAGG GTGTTTTGAC CAAGGTCAAG CAACAGCCTG CTATCACCCA GAAGATTTTC
TGGGCTGCTT TCAAGGGTAA GGCAGCTTTC ACTCATTTCC ATATCCCAGG TGCTTCTCTC
TTTGACGTCA TTTTCAAGAA GATCAAGGCT GCTACCGGTG GTCAGTTGAG ATTGGTGCTT
AACGGTGGTT CGCCAATTTC CTACGATGCG CAAGTGTTCA TCTCTACCTT AATAGCTCCA
ATGTTGTTGG GTTATGGTTT GACTGAAACC GGAGCTAATG CTTCGATTGT CGAACACACC
CAGTTTGAAC TCGGCTCGTT GGGTACAATT CTTGGCTCCC TCACTGCCAA GTTAATCGAC
GTCCCAGATG CTGGCTACCT TGCTAAGAAC AACCAAGGTG AAATCTTGTT GAAAGGTAAG
CCAATCACCA AGGAGTACTA CAAGAACGAG AAGGAAACCG CCGAAGCTTT TACAGAAGAC
GGTTGGTTCA GAACTGGTGA TATCGGTGAA TGGACTTCCA ATGGTGGCCT CAAGATAATC
GACCGTAGAA AGAACTTGGT GAAGACCTTG AATGGTGAAT ACATTGCGTT GGAAAAGTTG
GAATCTGTGT ACAGATCCAA CCCCTTGGTG TTCAACTTGT GTGTCTACGC CGACATCTCT
AAAGTCAAGC CTATTGCCAT TGTAGTTCCT ATCGAAGCCC ATCTTAGACT GCACCTCATT
GACGAAAAGA TCTATACTGC CGACGAACTT AAGTCTAAGA GCTTAGCCAT CTTGTGTCAC
GACATCAAGG TTGTGCATAC CGTTACTCAT TCATTGATTG CAACCGGTAA GGCCCAGGGC
TTGAGGGGTA TCGAATTGTT GCAATCCGTA GTTTTGTTGG ATGAAGAATG GACTCCTCAG
AACGGATTGG TCACTGCTGC CCAAAAGTTG CAGAGAAAGA AGATCTTGGC CCTCTGTCAT
GATAGAGTCG ATGCTGCATA TGCTGAATCT GGTTAGGTAA GACACGTTTT CAGTTGAACG
AAAAGTACAC CATTGAGTTT ATCTCACGGT TACGCTGCCT CCTTTTTACT AAGTTTTACT
TGATGGTATT TATTCGCCTT TTCACTTCAT GCCTCGCCTG ATATATATGT TTTGTTATTT
TAATCTATTT GATAAGTGTA ATTCTGTATA TTAATGGCCG AAG
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| Protein sequence | MAPLTVPVGE AKPGETAPRR KTANKAGAIF RPSDSSAFTM PEFFEECVAR QGNRNAMAWR
TLVDTHVETK KVHKVIDGVE TEVDKQWTYY EMSPYTHITY NDLLALVKNY SNGLIELGLA
PNQQSKLFIF ASTSPKWMQS FLGASFQNIS IVTAYDTLGE SGLTHSLVQT ESDAIYTENA
LLSNLIKPLS KTDKVKYIIH SDPIDPEDKR AGGSLYKQAQ ASKDKILEIH PDIKFISFDE
VLELGKNAKT KHENMPKPSD LACIMYTSGS TGEPKGVVLT QENVLAAVGG ISTVANRDMV
KNHDRVIAFL PLAHIFELAF ESVNFWWGSE LGYANVKTLT DTSCRNCQSD LIELKPTIMV
GVAAVWESVR KGVLTKVKQQ PAITQKIFWA AFKGKAAFTH FHIPGASLFD VIFKKIKAAT
GGQLRLVLNG GSPISYDAQV FISTLIAPML LGYGLTETGA NASIVEHTQF ELGSLGTILG
SLTAKLIDVP DAGYLAKNNQ GEILLKGKPI TKEYYKNEKE TAEAFTEDGW FRTGDIGEWT
SNGGLKIIDR RKNLVKTLNG EYIALEKLES VYRSNPLVFN LCVYADISKV KPIAIVVPIE
AHLRLHLIDE KIYTADELKS KSLAILCHDI KVVHTVTHSL IATGKAQGLR GIELLQSVVL
LDEEWTPQNG LVTAAQKLQR KKILALCHDR VDAAYAESG
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