Gene PICST_65016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_65016 
Symbol 
ID4851792 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp2838903 
End bp2840635 
Gene Length1733 bp 
Protein Length384 aa 
Translation table 
GC content44% 
IMG OID640393500 
Productpredicted protein 
Protein accessionXP_001386881 
Protein GI126275614 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.133626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CGAAAGCTTT TGTCTTGCTG ATAACATGAG TGTATCGCAG AGTATGTATA AGCAATGGAG 
GTGCAGTTTA GGTGCGAGAA GCGGCTTGAA TCATTCTGAT TGGTTGGTCT TGCTAGTGAC
TGTGCCCCAC ACTATTTAGA TATGGAATAT GAACCGGAAC GGATTGGATG GATGTTTTTG
AGCTTTAAAC TAGTCAAGAG TCGTTAGGAT GATCGAGTCA CACGATTCCG ATAATGATAC
GAAGATTTAA ATATATTGTA TTTTGATTGG GGATGGTAGA GGGTGAATTT CAAAACATCA
TTTACAGTGG CTTGATATTG CGAATCATGA TGCGAGTCAT GAATGCTAAA TTATTGACTT
ATACTATTCA ATGAATTCTT AAATATCAAT AAGTTAAGAA ATATCATTAT ATGACTGTGA
GAAATCAACA CGTACTTCTG GGATACTGCT TCGGAACTTT TAGAGTGCTA TAGAAGTCTA
AGTTCCTACT ATCTGATTCT ATCAGTATGA GGTGTTCCTG AGGATATAAC TGATAGGAGT
TTCCATTCCG CTTCCTATTA CTTTTTCGAT CTATAAGTTT TCTTACTAAC AGCACAGGTG
CTCCACAGTT CAAGGTGGGC CTCACGCCCG AAGAGAAATC GTTCTTTTCA GAGGTGTTCA
AGTCTTTAGA CCCGGAAAAC ACCGGAATCG TCACAGGTGA AAAGGCCAGG TCCACATTCG
AGAAATCTGG CTTGCCTCCT TCAATTTTAG GAGAAATCTG GCAACTTGCC GATACCAACA
ACTTGGGATT CTTGACCCAA TTTGGCTTCT GTTACGCTAT GCGTCTTATC GGGTACACCC
AGGCAGGCTA CCATCCATCA GCAGGCTTGG GTGATACTCC TGGACCATTG CCCAAGTTTG
CAAATTTGGG TTTGGCTCCC TTGCTGGCAC AAGCCACGAG AAACATTTCT TCTGCGCCAA
CTCAACTTCC AGTTGCTAGC TATCTTACAT CAGTTCCTCC AACTGACGTC CAGAAATTCT
CCCAGCTCTT TGTAAAAACC GTAGGGTCTA CTACTGGCGA ATTAGGAGGC ACGCAAGCCA
GAGACATCTT CATGAAGGCT AAGTTGCCTA CCGTGATTTT GGGCCAGATT TGGAGCTTGG
TTGATCGTTA CAATACTGGC CAATTAGGTC TTCCTGCTTT TGTAATTGCT ATGCATTTGA
TCCAGGGCTC TTTGAGCGGT CAGATCACCC AATTGCCGAC CGTTTTGCCA GAAAGCATCT
GGCAATCTGC AACTCCACAA GTAGCTAACC AGCAACAACC TGTAGATACT GGAAATCGCC
AGACTTCGTA CGGCTCAGTA AGCTCTCAGG CAACCACTGT AAGACGCCCT ACTCTGAGAG
AGGTATCTGC ATCTTCAGTA GCACCAGTTT CTGATGAATG GGTTGCTACA CCTACAATGA
AACAACAGTA CGCTTCCATT TTCAACAACC TCGAAAAGGG TAAGTCTGGC CACTTGAATC
CAAACCAAGT TGCTTCGTTC TTGATGACTT CTAAGCTTGG TGAACAGGAC TTAGCCACCA
TCTGGGACTT GTCGGATACT CAGAATACCG GTATCTTTGG TTTGACGGAG TTCTCTATTG
CCCTTTTCTT GGTCAACAGA AGGTTGGCTG GAGGAAGCTT GCCCAACATC GTTCCACATT
CCTTAATTGA ATCGTTGTCA GCACCTGCTT CTGCACCAGC TGCTGCTTCA GCA
 
Protein sequence
MSVSQSAPQF KVGLTPEEKS FFSEVFKSLD PENTGIVTGE KARSTFEKSG LPPSILGEIW 
QLADTNNLGF LTQFGFCYAM RLIGYTQAGY HPSAGLGDTP GPLPKFANLG LAPLLAQATR
NISSAPTQLP VASYLTSVPP TDVQKFSQLF VKTVGSTTGE LGGTQARDIF MKAKLPTVIL
GQIWSLVDRY NTGQLGLPAF VIAMHLIQGS LSGQITQLPT VLPESIWQSA TPQVANQQQP
VDTGNRQTSY GSVSSQATTV RRPTLREVSA SSVAPVSDEW VATPTMKQQY ASIFNNLEKG
KSGHLNPNQV ASFLMTSKLG EQDLATIWDL SDTQNTGIFG LTEFSIALFL VNRRLAGGSL
PNIVPHSLIE SLSAPASAPA AASA