Gene PICST_64944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_64944 
SymbolFTR2 
ID4851487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp1957324 
End bp1958986 
Gene Length1663 bp 
Protein Length379 aa 
Translation table 
GC content44% 
IMG OID640393195 
Productplasma membrane iron permease 
Protein accessionXP_001388001 
Protein GI126274618 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0672] High-affinity Fe2+/Pb2+ permease 
TIGRFAM ID[TIGR00145] FTR1 family protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CACACGCCTA AGTCAACAAC AATTGCTATA GCTGCTGCTA GTTGACTCTT TTTTTCATAG 
CTCTTCATTT CTTGAGTTAC CCTTTTTGAC TCCTCTATAA CCCCACACCC CTTAGCCTGT
GGTGCGAGTC TCTTTCCCCT TAAAGAGCTC AGAAAACAGG ATAAAGATTG CCAATTGTGA
GATTGCTATT GCTAATTGCT AGTAAAATCT CCAGTTTCCA TTTCAATCTT AACCACTCGT
AACTTCTCCA CAGAATGGTC AACGTTTTCA ACGTCCAGAT CTTCTTTGTG GTCTTCAGAG
AAGCATTGGA AGCCGTGATT GTGGTTTCGG TGCTTCTCGC CTTCTTGAAG CAAGGTTTAG
GAGGTGCTTC TGACGACCCC TTGGTCTACA AAAAACTTGT CCGACAGGTT TGGATCGGCG
CAGGGCTAGG TGTCCTAATC TGTTTAATTA TCGGTGGTGC TTTTATTGGT ACTTTCTACG
GTTTGGGTAG GGATATCTGG TCTAAGTCTG AAGACTTGTG GGAAGGTATC TTTTGTATTA
TCGCTACGGT CTTGATTTCG GTAATGGGTA TCCCCATGCT TCGTATCAAC AAGATGAAGG
AAAAGTGGAG AGTTAAGTTA GCCCGTGCTT TGCTTAAGAA GCCATCTTCC AGAGCTGAAA
AGTGGAAGAT TGGCTACTTG ACTAAGAGAT ATGCTCTTTT CTTCTTGCCA TTCATCACCT
GTTTGAGAGA AGGTTTGGAA GCCGTAGTGT TCGTAGGAGG TGTCGGTATT TCCGAGCCTG
CCAGTTCTTT CCCTCTTCCT GTTGTCTGTG GATTGATTGC TGGTATTGTA GTTGGTGTCT
TGTTGTACTA CTTCGGCTCC AGTGTCTCGT TGCAGATCTT CTTGGTCATC TCCACTTGTA
TCTTGTACTT GATCGCCGCT GGGTTGTTTT CCAGGGGTGT TTGGTTCTTT GAAAACTACA
AGTACTCCCA GCAAACCGGT GGTGATGCTG CTGAAAACGG TTCTGGCCCA GGTACCTACG
ATATCGCCAA GTCTGTATGG CACGTGAACT GTTGTAACCC TCTTACCGAT CACGGTTGGG
ATGTGTTCAA CGCTTTGTTG GGCTGGCAAA ACTCTGCTAC ATACGGTTCT GTCATTTCCT
ATAACATCTA CTGGCTCGCT GTCATTGCTG TTCTTGTATT GATGTACTAC GAAGAAAAGA
CTGGCCACTT GCCATTTGCC AAGGGATTGA CTCTTGGTAA GTTGAACCCT ATGTACTACG
TCAAGGGCAA GAAGAAGGAC GAGTTGACCC AGGAAGAGAA GGAAGAATTA TTTGAACAGG
TTAAGCACAA GAAGTTGGTC TCAGGCAGCG GTGCAGAAGA AGAATTGTCT TTGACCGACA
AGGAAGCAAA GTAAATGTAC TCTAGCTAGA ATCCTATAGG ATGGCTCAAA GTTTTGGCAC
ACACACACAC ACTATATATA TGCCAAAACC GGAGGCTGCT TCTACGGAAT GACTATTGTA
CATTTTCTTT CGTTGCTTGT CACATTTCAT GAATTAAGGG ATCCATTAAA CTATTTTTGT
TAACTTATAA TTAGAGCCGA GTCATCTTTT TCGACGATTT ATTAAGGGGT TGATACTTCG
TCGTTCGTTG GGAATTTTTA TTATTTAATA CATTTCATGG GGT
 
Protein sequence
MVNVFNVQIF FVVFREALEA VIVVSVLLAF LKQGLGGASD DPLVYKKLVR QVWIGAGLGV 
LICLIIGGAF IGTFYGLGRD IWSKSEDLWE GIFCIIATVL ISVMGIPMLR INKMKEKWRV
KLARALLKKP SSRAEKWKIG YLTKRYALFF LPFITCLREG LEAVVFVGGV GISEPASSFP
LPVVCGLIAG IVVGVLLYYF GSSVSLQIFL VISTCILYLI AAGLFSRGVW FFENYKYSQQ
TGGDAAENGS GPGTYDIAKS VWHVNCCNPL TDHGWDVFNA LLGWQNSATY GSVISYNIYW
LAVIAVLVLM YYEEKTGHLP FAKGLTLGKL NPMYYVKGKK KDELTQEEKE ELFEQVKHKK
LVSGSGAEEE LSLTDKEAK