Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_64520 |
Symbol | |
ID | 4841125 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | - |
Start bp | 844572 |
End bp | 845459 |
Gene Length | 888 bp |
Protein Length | 286 aa |
Translation table | 12 |
GC content | 49% |
IMG OID | 640392440 |
Product | predicted protein |
Protein accession | XP_001386753 |
Protein GI | 150866971 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3448] CBS-domain-containing membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0252407 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGTTCA AGTTTACCAT AGACAACGTA TTGAACAAAT ATGTTCCGGC TAATCGGCTC AACCGTCTTC CGCCATGGAT TGGCCGGTTC CTTGGAGCTC ATCAGGCCCC TCCCAGACAT GACTACTATA TTTGGCTCGA AACTCTCATT GGTACCTTTT GTGGTCTCTC GCTAATAGAG GGAATCTTCA AGAGTCATAC AGCTTTCACA AGCCATAATG CTCCTATGAT AATTGCTAGT TATGGAGCGC TGGCAATTCT CTGCTTCAAT GCTTCGCAGG CTCCTTTGGC CCAGCCTAGA AGCGTCTTTA TGGGTCATTT TTTGTCGTCA TTGGTAGGTA TTTGTATCCA GAAGTTGTTT CTGTTGAGTG CTGGTGGCCG GGAGCACTAC TGGGCTAGCG GTTCACTCAG TGTAGCTGTT GCTTCTGTCC TCATGTCGAT CTGCAACTGT GTGCATCCTC CAGCAGGTGC CTCAGCACTC TTGCCCTCTC TTGACGATCA GATTCGAAGC ATGAGCTGGT GGTATTTGCC AGTGCAGATC ATATCGTCGT TGTTGATTAT AACCGTCGCA TTAATCACGG GAAATATTGT GAGGTCGTAT CCCGTTTACT GGTGGACTCC TGCTCCTCTA CCAGTACCCA AGCCAACGCT GACTCCACTA GAGAAATCAG AGATGGAGAC TACAGCCGAT GCCCCAAGTT CCAGTCTGGA AGACGACGAT GCTATAGAAG GTATCACCTA TGTTCCCCTG TTGGCAACGA TCCAGATTGC GCACGATTCG GTGTTGGTGC CAGAGGAACT TGATCTTATG GAGGTGGAAG TAGAATGGCT CGATTCGCTC CGGATGAAAT TGCAAAGACT CCATGCCACC CCATCGCAAC AAGTGTGA
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Protein sequence | MVFKFTIDNV LNKYVPANRL NRLPPWIGRF LGAHQAPPRH DYYIWLETLI GTFCGLSLIE GIFKSHTAFT SHNAPMIIAS YGASAILCFN ASQAPLAQPR SVFMGHFLSS LVGICIQKLF SLSAGGREHY WASGSLSVAV ASVLMSICNC VHPPAGASAL LPSLDDQIRS MSWWYLPVQI ISSLLIITVA LITGNIVRSY PVYWWTPAPL PVPKPTSTPL EKSEMETTAD APSSSITYVP SLATIQIAHD SVLVPEELDL MEVEVEWLDS LRMKLQRLHA TPSQQV
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