Gene PICST_64280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_64280 
SymbolLEO1 
ID4841111 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp923940 
End bp925067 
Gene Length1128 bp 
Protein Length347 aa 
Translation table12 
GC content44% 
IMG OID640392426 
Productmember of the RNA polymerase II-associated Paf1 complex 
Protein accessionXP_001386594 
Protein GI150866861 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGACG AGGAGAAAAG ATTGAGCGAA GAAGAAGTCG ACGACTTATT TGGAGACGAC 
GAAGAAGAAG AAGAACAGGA TTCTGTGAAA AAATCGGGAA GATATGGAGA AAATGAAGAT
GAAGACGAAG ACGAAGATGA CGGGGAAGAC GAAGAAGAGC CAGAAGAGTT GAAGAACATC
AGTATTTCAC TTCCCAGGCA TGCAATCTCT CAAAAACCTG AAGACGATAC CTACTCGTTG
AAGATGCCAG TTTTCTTGAA TGTTGAAGCA CATCCGTTTG ACCCCACGGA GTTCAAAGAA
CGAGTTCAGC AGACAGCAGC AGAAAGATCG ACTAGAACGT CGTTGACAGA CAAACAGAAA
CAGAACGAAT TGGTAGCAGA AAAGCTATTG AATGAAAACA CTTTAAGGTG GAGATACTCC
AACTCCGGAA ACGATGAGAT TATCAAGCAA TCCAATTCCC ATTTTGTTCA ATGGAACGAT
GGTTCGTTGT CTTTGAAGAT CGGCAATGAA CTTTTTGACG TTCGTGAATT GCCGTTGACA
GACAACTTTC TCGTCAAGAC CCATGATAGC TACGAGATTC TTCAGCATAC ATCCATCCTC
AATAAGACCA TCAACTTGTT GCCCTCTTCC ACGTTGACAT CGACACACAG AAAGCTTACC
CAGGCCGTCA AGAGCATCCA GACCAAGGAC AAGATTTTGA ACACTATCAC CAACGACGAT
CCCATGATGA AACAGAGGTT GGCAGACGAG AATGAGCGTA AGACGTTACG TTTGAGAAGA
CAGCTTGAAT CTAAACGGAA ACTCCAGGAA GAACGTTTGG AACGTAGTAA CAGTCCTGCT
CTTAGAGGCC ACGAAAGAGA AAACGCATAC GAACGTTTTG CCAGAACCTA CGGCGAAGAG
GAGTATGACG AAGAAGACGA CTTTGTTGCT GGTGACGATG AAGAAGTCGA AGGCTATGAT
GATGAGGATG ATGAAGAAGA AGAAGAATAC GAAAGAGGTG CCGAAAGATT GAAGAAGTTG
AAGGATGAAG GAGCTTCAAA ATATAGAGAC AATGGCCGTG AAGAAGACGA AGACGAGAAG
CTGGCCAGAA AGAAGAGAAG AATCATCGAC TCGGACGACG ACGAGTGA
 
Protein sequence
MSDEEKRLSE EEVDDLFGDD EEEEEQDSLK NISISLPRHA ISQKPEDDTY SLKMPVFLNV 
EAHPFDPTEF KERVQQTAAE RSTRTSLTDK QKQNELVAEK LLNENTLRWR YSNSGNDEII
KQSNSHFVQW NDGSLSLKIG NELFDVRELP LTDNFLVKTH DSYEILQHTS ILNKTINLLP
SSTLTSTHRK LTQAVKSIQT KDKILNTITN DDPMMKQRLA DENERKTLRL RRQLESKRKL
QEERLERSNS PALRGHEREN AYERFARTYG EEEYDEEDDF VAGDDEEVEG YDDEDDEEEE
EYERGAERLK KLKDEGASKY RDNGREEDED EKSARKKRRI IDSDDDE