Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_64280 |
Symbol | LEO1 |
ID | 4841111 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | + |
Start bp | 923940 |
End bp | 925067 |
Gene Length | 1128 bp |
Protein Length | 347 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640392426 |
Product | member of the RNA polymerase II-associated Paf1 complex |
Protein accession | XP_001386594 |
Protein GI | 150866861 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGGACG AGGAGAAAAG ATTGAGCGAA GAAGAAGTCG ACGACTTATT TGGAGACGAC GAAGAAGAAG AAGAACAGGA TTCTGTGAAA AAATCGGGAA GATATGGAGA AAATGAAGAT GAAGACGAAG ACGAAGATGA CGGGGAAGAC GAAGAAGAGC CAGAAGAGTT GAAGAACATC AGTATTTCAC TTCCCAGGCA TGCAATCTCT CAAAAACCTG AAGACGATAC CTACTCGTTG AAGATGCCAG TTTTCTTGAA TGTTGAAGCA CATCCGTTTG ACCCCACGGA GTTCAAAGAA CGAGTTCAGC AGACAGCAGC AGAAAGATCG ACTAGAACGT CGTTGACAGA CAAACAGAAA CAGAACGAAT TGGTAGCAGA AAAGCTATTG AATGAAAACA CTTTAAGGTG GAGATACTCC AACTCCGGAA ACGATGAGAT TATCAAGCAA TCCAATTCCC ATTTTGTTCA ATGGAACGAT GGTTCGTTGT CTTTGAAGAT CGGCAATGAA CTTTTTGACG TTCGTGAATT GCCGTTGACA GACAACTTTC TCGTCAAGAC CCATGATAGC TACGAGATTC TTCAGCATAC ATCCATCCTC AATAAGACCA TCAACTTGTT GCCCTCTTCC ACGTTGACAT CGACACACAG AAAGCTTACC CAGGCCGTCA AGAGCATCCA GACCAAGGAC AAGATTTTGA ACACTATCAC CAACGACGAT CCCATGATGA AACAGAGGTT GGCAGACGAG AATGAGCGTA AGACGTTACG TTTGAGAAGA CAGCTTGAAT CTAAACGGAA ACTCCAGGAA GAACGTTTGG AACGTAGTAA CAGTCCTGCT CTTAGAGGCC ACGAAAGAGA AAACGCATAC GAACGTTTTG CCAGAACCTA CGGCGAAGAG GAGTATGACG AAGAAGACGA CTTTGTTGCT GGTGACGATG AAGAAGTCGA AGGCTATGAT GATGAGGATG ATGAAGAAGA AGAAGAATAC GAAAGAGGTG CCGAAAGATT GAAGAAGTTG AAGGATGAAG GAGCTTCAAA ATATAGAGAC AATGGCCGTG AAGAAGACGA AGACGAGAAG CTGGCCAGAA AGAAGAGAAG AATCATCGAC TCGGACGACG ACGAGTGA
|
Protein sequence | MSDEEKRLSE EEVDDLFGDD EEEEEQDSLK NISISLPRHA ISQKPEDDTY SLKMPVFLNV EAHPFDPTEF KERVQQTAAE RSTRTSLTDK QKQNELVAEK LLNENTLRWR YSNSGNDEII KQSNSHFVQW NDGSLSLKIG NELFDVRELP LTDNFLVKTH DSYEILQHTS ILNKTINLLP SSTLTSTHRK LTQAVKSIQT KDKILNTITN DDPMMKQRLA DENERKTLRL RRQLESKRKL QEERLERSNS PALRGHEREN AYERFARTYG EEEYDEEDDF VAGDDEEVEG YDDEDDEEEE EYERGAERLK KLKDEGASKY RDNGREEDED EKSARKKRRI IDSDDDE
|
| |