Gene PICST_64224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_64224 
SymboleIF2B 
ID4841155 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp601037 
End bp602458 
Gene Length1422 bp 
Protein Length467 aa 
Translation table12 
GC content45% 
IMG OID640392470 
Producttranslation initiation factor eIF2B subunit 
Protein accessionXP_001386515 
Protein GI150866797 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.167221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.261571 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTTC ATGCTATCAT TCTCTGTGGA GACGGCAAGG CGTTGAGTCC TTTTTCAGCG 
ACTAGATCTA CCGGGCTGCC CAAAGCTCTT TTGCCCATCG CTAACAAACC CATGCTCAGC
TACGTCTTGG ACTGGTGTGA GAAGGCCTTT TTCCCTCGTG TCACCGTAGT AGTAGGAACT
GATGCAGAAA GCGACATTCA GAATGCTGTA GACCAGTATA AGGCCGACAA AGTGAAGGAA
AACCAGGATA AGGACGCTTC TGACGATGGG ACTGGCCATT CTACAGCTAT TGAAGTGTAT
GGCTTTGATG CTGAGAACAG TGGACAAATC ATATACCAGC TTTACAAATC GAATGCCTGG
AAACCGTACC AGAACTTTGT TATATTGCCC TGTGATCTTG TAACAAACTT GCCTCCACAA
GTTTTGATAG AAGCCTACAG AAGCAAGGAT GAGTCAGACT TGGGCTTGAT TGTACACTAT
AGAAACCAGT TGGATATCGA AGACAAGAAG TCCAAGATTT TCGACAAGAA CTACACCATT
TACGGTGATG TAAGTGATGG TGGACGTAAG TTCCTCGATA TCTACTCCAA AGAAGATATC
GACTTCCACA AGGCATTAAA GATCAGAACA CAAATGTGCT GGAGATACCC CCAGGCTACA
ATCAGTACCA AGTTGTTGAA CAGTTGTGTC TTCTTCGGTT CAGAACAAAT ATTCAAGGTT
TTTGAAGATA ATCCTGACAA GTTCAGCGAG TCGTATTTCA AGAACAGATC AGTAACTAAA
GTTGTCCGTG ACTTGGCTAG AAGATCCTGG AGACATTCAG AGAATAAAGA GAGCATTGCA
TTTTTGGTCG TTCCACACCA GGCCACCTTC TTCAGAAGTT GTAACTTGCC GGTGTTAATG
GAAGCAAACC GTCACTTCAT GAAGATCCAA GCTACGGAAA AGGGTCAAAC CGGCTTTGCT
GGTCCAAAGG ATAAGACAGC TGCTAATGTA GGTATAGACT CGTTGATTGG CGACAATACT
CTTTTGGGAG AAAGGACAAA CGTCAAGAAG ACAGTTGTTG GCTCCAGATG CAACATCGGA
AAAAGGGTCA AGTTGACGGG CTGCCTTGTC ATGAATAACG TCACAATCGA GGACGATGTT
CAGTTGGAAA ACTGCATTAT TGGTAACAAT GTTCTTATTC ATAGCAAGTG TAAGTTGACC
AACTGTAACG TAGAGTCTAC CAACGAAGTT GCTCGAGGTA CCCAAGCCAA GGGTGACACA
TTGTTGCGTT TCTCGTTGGA GGGTTTGGTC GAAGGAGAAG GTGACGAATC GGCTATTGGA
AGCTCTCTGG ACGAGGATGA TTCTGAAGAC GACTCCGAGT CTGACTTCAG CGACTACGAA
GATGAATACG CCAATAATGA TGACGGATTG TTTGGATACT AA
 
Protein sequence
MEFHAIILCG DGKALSPFSA TRSTGSPKAL LPIANKPMLS YVLDWCEKAF FPRVTVVVGT 
DAESDIQNAV DQYKADKVKE NQDKDASDDG TGHSTAIEVY GFDAENSGQI IYQLYKSNAW
KPYQNFVILP CDLVTNLPPQ VLIEAYRSKD ESDLGLIVHY RNQLDIEDKK SKIFDKNYTI
YGDVSDGGRK FLDIYSKEDI DFHKALKIRT QMCWRYPQAT ISTKLLNSCV FFGSEQIFKV
FEDNPDKFSE SYFKNRSVTK VVRDLARRSW RHSENKESIA FLVVPHQATF FRSCNLPVLM
EANRHFMKIQ ATEKGQTGFA GPKDKTAANV GIDSLIGDNT LLGERTNVKK TVVGSRCNIG
KRVKLTGCLV MNNVTIEDDV QLENCIIGNN VLIHSKCKLT NCNVESTNEV ARGTQAKGDT
LLRFSLEGDE SAIGSSSDED DSEDDSESDF SDYEDEYANN DDGLFGY