Gene PICST_64178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_64178 
Symbol 
ID4840847 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp837112 
End bp838245 
Gene Length1134 bp 
Protein Length365 aa 
Translation table12 
GC content40% 
IMG OID640392162 
Productpredicted protein 
Protein accessionXP_001386751 
Protein GI150866969 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.46857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGT ATTCTGTCTA TCAGCAGATC TCGCCTGACG AGAAGTATAC CTACAAATTG 
TTACAGTTAC CGTCCGATTT GCTCAGACAC ATATCTGACA ATGAGACTGA CAATTTGCTT
ATCAAGTCAT CCACATCTAC AACTTCCAAT CCGGGACAAC TAGTTGTTTG TACAGATGAC
AAGACGTGGA AATTGAGGCA GATGAACCAT TCGAATACGG TTTTATTGCT CGACAATCAG
AACATAGTTC AGCATAGAAA GTTGGATAGT ATACTATCTG ATCATAATGT ATCTAGCGAT
AACAATTTAA TAGGGTTTGC CAGTTGTTCG TACGAGTATG AGTTGACTGA CTCGAAGGGA
TCCATAGATA TAACGAAGTT GCCTCGTCTT CACGGAGACG AATTACGAGA TTCTACAAAT
AACGTTCATG CTGTACAAAT TTCGGTTGAT GAATTACTTG AGAATTCGCC GATTTCTCGT
CAGGAATTCT TCCATGAATG GTATGAGCTT GGAGGCTGTG AAATTGACGG CAGAGCATAT
ATTCTTTCAC CGGAATACAT CACTGAGGTA TTATACACTT TGATAACGGC ATTGATAAGT
GAAAGCTTCA ATTACAGAAC AGACACAGTA GCCGTAGATA CTATTCACCA ATTATCTAAA
AAGCAGCTGA ATTTCGCCGA TTCGATCGTT ACTACTATAG TACAAAAATT CACAGTGCGA
TCTGATAAAC CAAATGAAGT TCTGCTAGAT AATGACAAGA TCGCTAAATG GTTTGGTATC
CATGTTCTTT CTGAGCGAGC AACGCTGTTG TTGTCTAGCA AGGAATTTCT CATCCAGTGG
AAATCGTCGC TTCCAGCATT CTACAACGTT TCGCTCGATT TGCACTATTT GAGAGGTTAC
TACTGTATGC CCGTAGAGGA TAACTTAATC TACATCAATA GAGACCATTT ATCGACAACG
CTTTCTGCCC GGTTTGTCGA GTTGTTCCAA TTAGACAGAG AATGGAACTA TGACGATTTT
GTACCTTTCA TCAAGGATTT GGTTCCTCCA GGCGTCAAAG TTGATCTGAT GATTCTCAAA
TTTGGCAAGA AGAAGAAAAT TGGGAAAGAT CGATTTGTGG TGACACCAAG GTAA
 
Protein sequence
MKKYSVYQQI SPDEKYTYKL LQLPSDLLRH ISDNETDNLL IKSSTSTTSN PGQLVVCTDD 
KTWKLRQMNH SNTVLLLDNQ NIVQHRNDNN LIGFASCSYE YELTDSKGSI DITKLPRLHG
DELRDSTNNV HAVQISVDEL LENSPISRQE FFHEWYELGG CEIDGRAYIL SPEYITEVLY
TLITALISES FNYRTDTVAV DTIHQLSKKQ SNFADSIVTT IVQKFTVRSD KPNEVSLDND
KIAKWFGIHV LSERATSLLS SKEFLIQWKS SLPAFYNVSL DLHYLRGYYC MPVEDNLIYI
NRDHLSTTLS ARFVELFQLD REWNYDDFVP FIKDLVPPGV KVDSMILKFG KKKKIGKDRF
VVTPR