Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_64178 |
Symbol | |
ID | 4840847 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | - |
Start bp | 837112 |
End bp | 838245 |
Gene Length | 1134 bp |
Protein Length | 365 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640392162 |
Product | predicted protein |
Protein accession | XP_001386751 |
Protein GI | 150866969 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.46857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGT ATTCTGTCTA TCAGCAGATC TCGCCTGACG AGAAGTATAC CTACAAATTG TTACAGTTAC CGTCCGATTT GCTCAGACAC ATATCTGACA ATGAGACTGA CAATTTGCTT ATCAAGTCAT CCACATCTAC AACTTCCAAT CCGGGACAAC TAGTTGTTTG TACAGATGAC AAGACGTGGA AATTGAGGCA GATGAACCAT TCGAATACGG TTTTATTGCT CGACAATCAG AACATAGTTC AGCATAGAAA GTTGGATAGT ATACTATCTG ATCATAATGT ATCTAGCGAT AACAATTTAA TAGGGTTTGC CAGTTGTTCG TACGAGTATG AGTTGACTGA CTCGAAGGGA TCCATAGATA TAACGAAGTT GCCTCGTCTT CACGGAGACG AATTACGAGA TTCTACAAAT AACGTTCATG CTGTACAAAT TTCGGTTGAT GAATTACTTG AGAATTCGCC GATTTCTCGT CAGGAATTCT TCCATGAATG GTATGAGCTT GGAGGCTGTG AAATTGACGG CAGAGCATAT ATTCTTTCAC CGGAATACAT CACTGAGGTA TTATACACTT TGATAACGGC ATTGATAAGT GAAAGCTTCA ATTACAGAAC AGACACAGTA GCCGTAGATA CTATTCACCA ATTATCTAAA AAGCAGCTGA ATTTCGCCGA TTCGATCGTT ACTACTATAG TACAAAAATT CACAGTGCGA TCTGATAAAC CAAATGAAGT TCTGCTAGAT AATGACAAGA TCGCTAAATG GTTTGGTATC CATGTTCTTT CTGAGCGAGC AACGCTGTTG TTGTCTAGCA AGGAATTTCT CATCCAGTGG AAATCGTCGC TTCCAGCATT CTACAACGTT TCGCTCGATT TGCACTATTT GAGAGGTTAC TACTGTATGC CCGTAGAGGA TAACTTAATC TACATCAATA GAGACCATTT ATCGACAACG CTTTCTGCCC GGTTTGTCGA GTTGTTCCAA TTAGACAGAG AATGGAACTA TGACGATTTT GTACCTTTCA TCAAGGATTT GGTTCCTCCA GGCGTCAAAG TTGATCTGAT GATTCTCAAA TTTGGCAAGA AGAAGAAAAT TGGGAAAGAT CGATTTGTGG TGACACCAAG GTAA
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Protein sequence | MKKYSVYQQI SPDEKYTYKL LQLPSDLLRH ISDNETDNLL IKSSTSTTSN PGQLVVCTDD KTWKLRQMNH SNTVLLLDNQ NIVQHRNDNN LIGFASCSYE YELTDSKGSI DITKLPRLHG DELRDSTNNV HAVQISVDEL LENSPISRQE FFHEWYELGG CEIDGRAYIL SPEYITEVLY TLITALISES FNYRTDTVAV DTIHQLSKKQ SNFADSIVTT IVQKFTVRSD KPNEVSLDND KIAKWFGIHV LSERATSLLS SKEFLIQWKS SLPAFYNVSL DLHYLRGYYC MPVEDNLIYI NRDHLSTTLS ARFVELFQLD REWNYDDFVP FIKDLVPPGV KVDSMILKFG KKKKIGKDRF VVTPR
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