Gene PICST_64096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_64096 
Symbol 
ID4840973 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp759165 
End bp759776 
Gene Length612 bp 
Protein Length188 aa 
Translation table12 
GC content45% 
IMG OID640392288 
Productpredicted protein 
Protein accessionXP_001386554 
Protein GI126140064 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.20813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0799005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AGATTTGCCT CTACTGAAGC AGCCAAGGAA AACAAAGAAG AAAAGCCTGT TGAAGGTGAG 
GAACCTGTCA AGGAGGGTGA GGCTTCTGCC GAAGAACCAG CCATTTCTGC TGAAGAACAG
GCCATCAATG AATTGAAGGA AAAGCTCGAT GCTAAAGACA AAGAACTTGC CAACATGAAG
AACCACTACG CCAGATCCAT TGCTGACTTC CGTAACTTGC AAGACACTAC AAAGTTGGAA
GTTCAAAAAG CTAAAGACTT TGCTTTGCAA AAGTTCGCCA AAGACTTGTT AGAGTCGTTG
GATAACTTCA GTTTGGCACT TGAGTCTGTC AAGGAAGAAA CATTGAAGAC CAACGAAGAG
GTCAAGAGCT TGTACGAAGG TGTCAACATG ACAAGAAACA TCTTTGAAAA GACTTTGAGC
AGACACGGCA TAGAAAAGAT CGATCCAATT GGCCAACAAT TCGATCCTAA CCAGCACGAG
GCAACCTTCC AAGTCCCACA ACCAGACAAG GAACCCGGTA CTGTTTTCCA CGTACAACAG
CACGGATACA CTTTGAACTC CAGAGTGTTG AGACCAGCCA AGGTCGGTTT GGTCAAGGGT
GAGGATAACT AA
 
Protein sequence
RFASTEAAKE NKEEKPVEAI SAEEQAINEL KEKLDAKDKE LANMKNHYAR SIADFRNLQD 
TTKLEVQKAK DFALQKFAKD LLESLDNFSL ALESVKEETL KTNEEVKSLY EGVNMTRNIF
EKTLSRHGIE KIDPIGQQFD PNQHEATFQV PQPDKEPGTV FHVQQHGYTL NSRVLRPAKV
GLVKGEDN