| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_63653 |
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| Symbol | FBX1 |
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| ID | 4840674 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | - |
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| Start bp | 929333 |
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| End bp | 932245 |
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| Gene Length | 2913 bp |
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| Protein Length | 868 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640391989 |
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| Product | Leucine rich repeat protein, contains F-box |
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| Protein accession | XP_001386367 |
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| Protein GI | 150866692 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.422768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.952681 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GACAATACAA AAAATTCTAA TAATGCGAAC GGAAATGTGC CTCCTGACTT CTTCAACAGA
CTCCAGACGT TTCCTTTGTT CAATAAGGCT CCAAAGTCTT TCCACACTAA AGTAGCGTCC
AAATTGACAC TCATGCAATA CCATCCTCAA GAATACATAA TCAAGAAAGG AGACCCTTCC
AAGTCAATGT ACTGGATCTT AAAGGGAACC GTAAGCGTTA CATCCACTGA TGGAGAGTCT
ATTTATGCCG AGCTAGCAGC CGGTAGCTTC TTTGGTGAGA TCGGAATCTT GTTCAACAGA
CCCCGTACTG CAACTGTCGT AGCCCGTACT AAAGTATTGG TAGGAGTTTT AACTAGCGAT
GCCTTAAATA CTGTACTAAA ACACTACCCT TTGATAGAGA GAAGAATCAG AGATGAAGCT
CAGGAACGTT TAGCCATGCA AGATAAGAAG AACAAATACG ATCTTCCAAA CTTGATCTCC
AACAAGATGA TTGAATCGGC TCCGAGCTTG CCTCCGATAA GAAATGGAAT CAATGCGAGT
GCCTTAGCTA CTCAAACTTC CGCGATTCCT GGCCCCTCTC TCCCTCCCAT CTCCACTAGT
CCTTCTCCTT CGCTTGCTTC ACCATTGTTA CCTCTGGGCA TCAACACTCC ACCAAATCTT
GCTAACAATC ATAATGTAGA CGCTACCATA TCGATTCAGG ACTTCATAAA GAACTTGCCG
ATTTTCCAGA ATCTTCCTTC CACCATCATC CATCAGTTGG CTCTTGGCGT CGAGCCCATC
AATTTCAATG CCTTTGAATA CATCATCCAC AAAGGTGACA CCAATTCTGA TATCTACTTC
ATCATTAACG GCGAAGTGGA AGTCATAGAC TACTCTCGTA ACCAGGAAGG AGCTCATATT
GAGCGTATCT TGGCCCGTTT GAGTTCTGGA AGTTACTTTG GCGAAATGTC ATTCCTTTCG
TTTCTCAACG ACAAGCACCT GGATTGTGTT CGTAGTGCCA GCATCAGATC CATCTCCACA
GTAGAATTGA TGGTGGTCAA AAGCGACAAG TTGGAGGACT TGTGCGAAAA GTACCCCTTC
ATCGTAGACG ATATGCGTAA AACTGCGGAG GAAAGAAACA AACTCAACAA TAGCATCAAT
TCCAAAGGAA GCGAGCACGA TAACAAGACG AGATTGTCCA TTGATTATAT CATCCATAAG
CAAGATAAAG ACCGTAGTGA TGAGGAAGAG TCTTCTCATG ATACTTCTGA GAAATCTTCA
CCTGAGAAGT CACCTTCTTC TCAGCCAAAC TTGCAACACC CTCAGTCTCA ACGTGTAGGA
GTATCACCTA TTTTTGCTTC CAATTGGACA TTTGGTGATA CAAAGGCCAA GGTGTTATCA
GGAAGAGTAT CTCGTTCGAT ATCTCCTATT TCCTATGCCG ATGCCCAGTC ACCTTCTGTC
TCTCCCATTT CCAGCGATGC AAAGATGTCC ACTAGCACAA GAAACACTTC ATTTGCTGAT
GAACCTTTTT CGAGAAAGAG AAAGTCAGTT TCTAACAGTT TTTTGAACGA TGAGACTGAT
CCAATGTCAT TGGAGTTACC TCTGTTGAAT CCAGTAGTAC CATCTGTAAA TTATTTCCAG
AACTTCCAGT TTGCAAACAG TACCAGCAAC AGAAATGCTT TCCAGTACAT GCCACACAAT
AAGAGAATCA GATTGGCCAG TATCAGTGGC ACTGGAAGAA GAAGATCGTC CATCTTGAGC
AACAATGGCC CTCTTCCAGA TAGGATCCTC TTACGAGTGT TCGAGTTCTT GTCATTGCCG
GAATTGATGA AGTTGAGGAT CATCAGTAGA CGTTGGAGGC AGTTGTTGAG TGTAGCCTCC
AATTTGTGTA CCAATTTGGA TTTGACTCCA TGGAATACTT CTATAGACGA CCAGGCACTT
ATTTCCATCA CCGACTTCGT AGGAACCAGA CCTCAGCAGA TCAATATCTC AAACTGCTTT
CACATCACCG ATGAAGGCTT CAGCTACATG GTTAACGAGA TTGGTATTTC AGGAAACATT
AAAGTGTTGA AGATGAAGTC GAACTGGGAA GTGAGCGCCA TGGCTATTAT GGATTTAACA
GTTCCCAGTG TTGGTGGCTA TTTAGAAGAG ATTGACTTAT CCAACTGTAG AAAGGTCAGA
GATATTGTGT TGGAAAGATT GCTCGGCTGG GACTCTTCTG CTATAAAGGA AGAACTTTCT
CAGCAGCAGA ATATTAACGG TAGTAGCCCC GAGATCGACC ACGACTTGGA TCAGATCGGG
TGCAAAAGCT TGAAGATCCT AAACATAGGC TATTGCAAAC ATCTTACTGA CAATGTGATG
CAACATATTG CCAACCACGC CAGTCAACGT TTGGAAAGCT TGGATCTTAC CAGATGTACC
GCTATCACTG ACAGAGGGTT CCAGTACTGG ACTTACAAGT CGTTTCCAAA TTTGAAGAAG
TTGTCGTTGA AGGACTGCAC TTTCCTCACC GACAAGTCAA TTATCTCCAT TGCTAACTCT
GCTACCAACT TGGAGATCCT TGACTTGAAC TTTTGCTGTG CTCTTTCTGA TATCGCAATC
GAAGTCTTGT GTTTGGGATG TCCTAACATT CGCGAGCTTG ATCTTTCGTT CTGTGGTTCT
GCAGTAAGTG ATTCATCGTT AGTTGCAATC TCCTTGCATC TAAGAAGCCT CGAAAAGCTC
ATCCTTAAAG GCTGTGTTAG AGTTACCAGA GCTGGTGTTG ACGCATTGTT GAGTGGTTGC
TCGCCCTTGA GCTACATAAA TATCAGCCAG TGTAAGAACG CTCACATATA CCCGGGTAAC
ATTCCTGCTC AAAAGCTCAA TGTCAACCCC CAGACGAAAT CGGCTTTCGT TACAGCCGGT
TCCAACCAGA ACATTATTGA GATTGTGATC TAG
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| Protein sequence | DNTKNSNNAN GNVPPDFFNR LQTFPLFNKA PKSFHTKVAS KLTLMQYHPQ EYIIKKGDPS
KSMYWILKGT VSVTSTDGES IYAELAAGSF FGEIGILFNR PRTATVVART KVLVGVLTSD
ALNTVLKHYP LIERRIRDEA QERLAMQDKK NKYDLPNLIS NKMIESAPSL PPIRNGINAN
ATISIQDFIK NLPIFQNLPS TIIHQLALGV EPINFNAFEY IIHKGDTNSD IYFIINGEVE
VIDYSRNQEG AHIERILARL SSGSYFGEMS FLSFLNDKHS DCVRSASIRS ISTVELMVVK
SDKLEDLCEK YPFIVDDMRK TAEERNKLNN SINSKGSEHD NKTRLSIDYI IHKQDKDRSD
EEESSHDTSE KSSPEKSPSS QPNLQHPQSQ RVGSPSVSPI SSDAKMSTST RNTSFADEPF
SRKRKSVSNI VPSVNYFQNF QFANSTSNRN AFQYMPHNKR IRLASISGTG RRRSSILSNN
GPLPDRILLR VFEFLSLPEL MKLRIISRRW RQLLSVASNL CTNLDLTPWN TSIDDQALIS
ITDFVGTRPQ QINISNCFHI TDEGFSYMVN EIGISGNIKV LKMKSNWEVS AMAIMDLTVP
SVGGYLEEID LSNCRKVRDI VLERLLGWDS SAIKEELSQQ QNINGSSPEI DHDLDQIGCK
SLKILNIGYC KHLTDNVMQH IANHASQRLE SLDLTRCTAI TDRGFQYWTY KSFPNLKKLS
LKDCTFLTDK SIISIANSAT NLEILDLNFC CALSDIAIEV LCLGCPNIRE LDLSFCGSAV
SDSSLVAISL HLRSLEKLIL KGCVRVTRAG VDALLSGCSP LSYINISQCK NAHIYPGNIP
AQKLNVNPQT KSAFVTAGSN QNIIEIVI
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