Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_63364 |
Symbol | VAN1 |
ID | 4840555 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | - |
Start bp | 1012996 |
End bp | 1014273 |
Gene Length | 1278 bp |
Protein Length | 403 aa |
Translation table | 12 |
GC content | 46% |
IMG OID | 640391870 |
Product | Mannan polymerase I complex VAN1 subunit (M-pol I subunit VAN1) (Vanadate resistance protein) |
Protein accession | XP_001386380 |
Protein GI | 150866702 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GAAGATAGCT ACGAGTTTTT CCTGGTGACC AAAGATGGTG TCACACAGCA CAGTCCTGGC GATAACGGCC AGAATGTGGA CTTGTCCAAC GTGGCTGGTG GTGAAAATGA TGCTGGAGTC CGGAATCTGG GCTCAGAGCC TGTAGATCAT TACGCCTCAG AAGTTGAATA TTTTGACTTG CAGGACTACA GAGGCTCGGC TGATGGCCTT TCTCAAGGCG ATGTAGTTTT GTTTCTTATG CCTTTGAGAA ATGCCGAAGC AGTATTGCCC ATGGCTTTCT ATAACCTCAT GAACTTGACC TACGACCATA GTTTGATCGA CATAGCGTTT TTGGTATCCG ACTGCTCGCC AGACGACAGG ACATTGGAAA CAGTTTTTGA CTACTCTGTT TCCTTGCAGA ACGGAACATT GGTAGACAAG TTAAGAGCAG AGGACGAAGA AAGAAAGAAG AGTGATGTTC GTGGCTCATC TGACTTATAC AAAAACTACA TGGACAAGAA CTATATGGAT GGAGTCCGTA GAGCTTATCT GAATCCCGAA CATCACAAGG GCTATAGAAA GCCGTTCAGA TCGGTGTCGA TCTTCAAGAA GGACTTTGGT CAAATCATTG GCCAAGGCTT CAGCGATAGA CATGCTGTTA AGGTCCAGGG TATTCGTCGT AAGTTGATGG GAAGAGCCAG AAACTGGTTG ACTTCAAGTT CTTTGAAGCC GTACCATTCA TGGGTCTATT GGAGAGATGT GGATATCGAA ACATGCCCCG GTAATGTGAT CGAAGAGTTG ATGCAACACG ACTACGATGT GATGGTACCT AATGTGTGGA GACCTTTACC CACTTTCTTG GATGAGCAGG AACAGGCCTA TGACTTGAAC TCGTGGATAG AATCAGACCC AGCATTGGAA TTGGCCAAAA AATTGGACGA AGACGACGTA ATTGTAGAAG GGTACGCCGA GTATCCAACA TGGAGAGTAC ATTTAGGATT TATAAGAGAC GCCAATGGAA ATCCTAAAGA AGTAGTCGAT TTGGATGGTG TTGGTGGGGT GTCGATATTG GCACGAGCCC AGATCTTCAG ACAGGGAGTT CATTTCCCAG CGTTCACATT CTTGAACCAC GCCGAGACAG AAGCATTTGG TAAGATGGCC AAAAAAATGG GTTTCAGAGT CGGCGGTTTG CCGCATTACA CTTTATGGCA TATCTACGAA CCAAGTGAAG ATGATCTTGA GAAAGTCTCC AAGTTGGAAA GAAAGAAGAG GAGACAGAGG TGGAAGATCT CCAGCTGA
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Protein sequence | EDSYEFFSVT KDGVTQHIRN SGSEPVDHYA SEVEYFDLQD YRGSADGLSQ GDVVLFLMPL RNAEAVLPMA FYNLMNLTYD HSLIDIAFLV SDCSPDDRTL ETVFDYSVSL QNGTLVDKLR AEDEERKKSD VRGSSDLYKN YMDKNYMDGV RRAYSNPEHH KGYRKPFRSV SIFKKDFGQI IGQGFSDRHA VKVQGIRRKL MGRARNWLTS SSLKPYHSWV YWRDVDIETC PGNVIEELMQ HDYDVMVPNV WRPLPTFLDE QEQAYDLNSW IESDPALELA KKLDEDDVIV EGYAEYPTWR VHLGFIRDAN GNPKEVVDLD GVGGVSILAR AQIFRQGVHF PAFTFLNHAE TEAFGKMAKK MGFRVGGLPH YTLWHIYEPS EDDLEKVSKL ERKKRRQRWK ISS
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