Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_62444 |
Symbol | |
ID | 4839884 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | + |
Start bp | 147010 |
End bp | 147729 |
Gene Length | 720 bp |
Protein Length | 231 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640391199 |
Product | predicted protein |
Protein accession | XP_001385358 |
Protein GI | 150865939 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TGGTGGCTCA AAAATGGATT GCCAGAGCTG ATTGCTGGAC GAAGTGGAAC CGATTTCATT TTTGAATCAG ATTCTAACAA GATTAGAAGG AGAGGTAACA GAACCATTGA ATATCGTGAC TATTACATCT TGTTCTACGA CTTGTCACAA CTAGTTTTTG AAATCCAGTT TGAGTCGGAA GATCCTCGCT CCACTGTCAA GTTGATTAAT AGCTATGCCA AGCCTATCCC AGTGGTACGT AAAGATTTGC TCGATAAGTA TCATAAATTA TACGGGCAAC AAATCGTTTC TTATGCAGCA CAATTTCTTG GAACTAAAAT TCAAGATGAA ATAGTCAGCC ACTCGTTGCA GGTCAGTGGA GCAGAAATCA TTCTGCCAAT TGGTAATAAA TCTTTTGGAG TTACCATCTA TAAAAACTTA AACAACACAA ATGTCTCCAA GATTGATGAA ATCAAACCTG GCGATGTACT CTGGGTCAAG AATGGAAAGT ATGTCAGTCA CAAGGGTCTT ATGGGAGCCA AGTCTGTCAC CTTGGAGGGT CCTGACAACG TCTATACTGC CATTATTTAT GAATATGATC CCAAGAAGGA AAAGTTCAAA GTAATCGAAC TGGATTCCAC TGGCCATGTT AAGAAGGAAA GTTTCAAAAT CGGTGAATTC AAGTCTGGAC GCATCAGAGT GTTCAGACCA GTTGGAAGAG ACTACGTTGA GTGGGACTAG
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Protein sequence | WWLKNGLPES IAGRSGTDFI FESDSNKIRR RGNRTIEYRD YYILFYDLSQ LVFEIQFESE DPRSTVKLIN SYAKPIPVYH KLYGQQIVSY AAQFLGTKIQ DEIVSHSLQV SGAEIISPIG NKSFGVTIYK NLNNTNVSKI DEIKPGDVLW VKNGKYVSHK GLMGAKSVTL EGPDNVYTAI IYEYDPKKEK FKVIESDSTG HVKKESFKIG EFKSGRIRVF RPVGRDYVEW D
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