Gene PICST_62444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_62444 
Symbol 
ID4839884 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp147010 
End bp147729 
Gene Length720 bp 
Protein Length231 aa 
Translation table12 
GC content40% 
IMG OID640391199 
Productpredicted protein 
Protein accessionXP_001385358 
Protein GI150865939 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TGGTGGCTCA AAAATGGATT GCCAGAGCTG ATTGCTGGAC GAAGTGGAAC CGATTTCATT 
TTTGAATCAG ATTCTAACAA GATTAGAAGG AGAGGTAACA GAACCATTGA ATATCGTGAC
TATTACATCT TGTTCTACGA CTTGTCACAA CTAGTTTTTG AAATCCAGTT TGAGTCGGAA
GATCCTCGCT CCACTGTCAA GTTGATTAAT AGCTATGCCA AGCCTATCCC AGTGGTACGT
AAAGATTTGC TCGATAAGTA TCATAAATTA TACGGGCAAC AAATCGTTTC TTATGCAGCA
CAATTTCTTG GAACTAAAAT TCAAGATGAA ATAGTCAGCC ACTCGTTGCA GGTCAGTGGA
GCAGAAATCA TTCTGCCAAT TGGTAATAAA TCTTTTGGAG TTACCATCTA TAAAAACTTA
AACAACACAA ATGTCTCCAA GATTGATGAA ATCAAACCTG GCGATGTACT CTGGGTCAAG
AATGGAAAGT ATGTCAGTCA CAAGGGTCTT ATGGGAGCCA AGTCTGTCAC CTTGGAGGGT
CCTGACAACG TCTATACTGC CATTATTTAT GAATATGATC CCAAGAAGGA AAAGTTCAAA
GTAATCGAAC TGGATTCCAC TGGCCATGTT AAGAAGGAAA GTTTCAAAAT CGGTGAATTC
AAGTCTGGAC GCATCAGAGT GTTCAGACCA GTTGGAAGAG ACTACGTTGA GTGGGACTAG
 
Protein sequence
WWLKNGLPES IAGRSGTDFI FESDSNKIRR RGNRTIEYRD YYILFYDLSQ LVFEIQFESE 
DPRSTVKLIN SYAKPIPVYH KLYGQQIVSY AAQFLGTKIQ DEIVSHSLQV SGAEIISPIG
NKSFGVTIYK NLNNTNVSKI DEIKPGDVLW VKNGKYVSHK GLMGAKSVTL EGPDNVYTAI
IYEYDPKKEK FKVIESDSTG HVKKESFKIG EFKSGRIRVF RPVGRDYVEW D