Gene PICST_61406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_61406 
Symbol 
ID4840402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp1411838 
End bp1413076 
Gene Length1239 bp 
Protein Length413 aa 
Translation table12 
GC content43% 
IMG OID640391717 
Productpredicted protein 
Protein accessionXP_001385969 
Protein GI150866389 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.888541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AAAGAATTTC ATGAGGAGAG AATCAACATC GTGTTGACAT TTGCTAATAA CTACCTTTTC 
CTTGTCGTAG GTTTCACTGT AGCATTGTGT ATTTACTGGG GGTCTTACTA TAATAGAGCT
TCCAGGTACA AGAACTTGCG ATTTGCCGTA GTCAATGCTG ATACCCAAGT GGGAGAATTA
CCTGCAATTG TGGGGCCTAT AGTCGCAAAC TACTTTAATC TCACCTCCAT CCAGCTGCTT
GGAAGCTTTG ATATCTGGGA TTTCGAAAGA ATATCCACTT TGGCCATTAG CCACAATAAC
ACCATCACCG AAGAAGTGTA TAGACAAGTA CACCACCAAA AGTATTGGGC TGCGTTTTAT
ATTAGACCCA ATTCCACATT GGACTGGGTC AGTGCGATGG AAGCAGAATC TACTGCTTTT
TCGCCAGCTG TGCTCCTCGA GGCTATTTAC GAGACTGGTA GGGACTTCAA TGCCGTCAAT
CTCTATATTT CGTCCATTGT TAACCAGATC ATCCGATATT ACAATGCATA CATTCAACAA
ACTCCATTAG TTGAAGACTT GTTGAGCACC TTGAATTCAA CACAGCAAGT TAATGTTATT
TCCAATGCTC CTGGCTTGTT GACGACGCCG CCTACTTTTG TAATCAACGA TAGACTCCCA
GTTTCCAACC AGATTGTCCA AGCGCCCTTT CAAATCGGAC TTATCTACTT GGTGATCTTC
TCGTTCTTCC AATTCATCTT CCAAATCAAG ATGCACATGT ACATGGCCAC CAAGCTCAAG
GGATTCAAGT ATGTAGCATA CAGAATGGTT GCTTCACAAA TAGCCTACCT CGTCCTATCG
TTGGCATTTG TCACGTTGAA CACTGCCTTT GGCCTCAAAT ACAATACCAC TTTTGGTCGT
CTGGGCTTCT TGGTCATCTG GTCATTTGGC TACTTGACTT TGAGTTCCTT AGGCAGTATC
ATTGAAGTCG TTGCATTGAT ATTATTTGCT GTCAAGCCAC AGTTGATTGG ATTTTTGTTG
TTGTTCACGG CTGTAGTCAA TTTGTCACCC ACCGTTTCAC CCATTGTTTT GTGTCCAGAC
TTCTACAGAT ATGGTTATGG TATACCTGTG AGAAACGCTT ACGAGCTAAT GCAAGTAGCC
TACTTCGACT CGTGGAAAGG TCGTATGGGC AGAAACATCG GCGTACTTCT CACCTGGATT
GTCGTTACCA ACGTAGCCAT GCCGTTTGTC ATGAAATGG
 
Protein sequence
KEFHEERINI VLTFANNYLF LVVGFTVALC IYWGSYYNRA SRYKNLRFAV VNADTQVGEL 
PAIVGPIVAN YFNLTSIQSL GSFDIWDFER ISTLAISHNN TITEEVYRQV HHQKYWAAFY
IRPNSTLDWV SAMEAESTAF SPAVLLEAIY ETGRDFNAVN LYISSIVNQI IRYYNAYIQQ
TPLVEDLLST LNSTQQVNVI SNAPGLLTTP PTFVINDRLP VSNQIVQAPF QIGLIYLVIF
SFFQFIFQIK MHMYMATKLK GFKYVAYRMV ASQIAYLVLS LAFVTLNTAF GLKYNTTFGR
SGFLVIWSFG YLTLSSLGSI IEVVALILFA VKPQLIGFLL LFTAVVNLSP TVSPIVLCPD
FYRYGYGIPV RNAYELMQVA YFDSWKGRMG RNIGVLLTWI VVTNVAMPFV MKW