| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_61171 |
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| Symbol | |
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| ID | 4839562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 1221082 |
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| End bp | 1222983 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640390877 |
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| Product | predicted protein |
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| Protein accession | XP_001384916 |
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| Protein GI | 150865621 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0481] Membrane GTPase LepA |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.100002 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ACTACTAAAA AAGTACTTAG TACTGAAGAG AAGAAGATCT TATTGAATAA AGAAGCGCAT
AGAAAAGCTG TTCAAGAAAG GATAGCAGAC ATTCCGATAC GAAATTATAG AAATTTCAGT
ATCGTCGCCC ATGTTGACCA TGGAAAATCG ACTCTCTCTG ACCGGTTGTT GGAACTAACA
GGTGTTATCC AACCTGGTTC TAATAAGCAG GTGCTAGACA AATTGGACGT GGAAAGAGAA
AGGGGCATTA CTGTGAAGGC ACAGACAGTG TCCATGTTCT ACAATGATCC TGAGACTGGG
GAAGACTATT TGTTGCATCT AGTGGATACT CCTGGTCATG TGGATTTCAG AGCTGAGGTA
TCTAGATCGT ATGCTTCATG CGGAGGAGCA CTTCTCTTAG TAGATGCTTC TCAAGGTGTG
CAAGCCCAGA CTGTGGCCAA TTTCTACTTG GCGTATAGTA TGGGACTTAA ACTTATACCG
ATTATCAACA AGATCGATTT AGATCAGGCA GACATTCCTC GTGCCATGGA CCAAGTAGAA
GAGACGTTTG AATTACCCAG AGAAGATTGC ATTCCTGTTA GTGCAAAGAC CGGACTCAAT
GTCGAGAATA TTATTCCTCT GATTATCAAG AACATTCCTG CTCCTAATGG AGACGACAGC
AAGCCACTTA AGGCACTTTT AGTAGACTCA TGGCATGATC CCTATTTGGG GGTGGTCATG
TTAGTTCATG TTGTGGATGG TAAAATGAAG AAGGGTATGA AGTTATTATC TGCACACTCA
GACAAAGTCT ACGAAGTAAA AGAAGTGGGG ATCATGTACC CCGATAAAAT GCAAATGGAC
CAGATCAAGG CTGGACAAGT TGCCTATGTA GTCCCGGGAA TGAAGAACCC CAGAGAAGCT
CTTGTTGGTG ATACTTTCTT CCAGTATGGT AAACATGAAG GATTGGAAGC TTTACCGGGG
TTCGAGGAAC CAAAACCGAT GGTATTTCTT GGAGCTTTTC CAGCAGATGG CACTGAATTC
AATGTTATGG ATGATCAAAT GCAGAATTTG GTTTTGAATG ACAGATCTGT CAGCCTTGAA
AAGGAAACTT CCAATGCCTT AGGTTTGGGC TGGAGGCTTG GATTTCTCGG GTCATTACAT
GCTTCAGTGT TTAAAGAAAG ATTGGAGAAT GAATATGGAG CCAAGATTAT TTTGACAGCT
CCTACTGTAC CATACAAAAT TGTATATAGA GATGGCAGAG AAGAAATCAT CACCAATCCA
GATGGTTTTC CTGATGCCAA GAACCAAGTT AATGTCGATA CCTATATGGA GCCATATGTG
AACGCAATCA TGTCTGTTCC AAACGAATAT GTTGGCACAG TGATGACATT GTGTTTGAGC
AACAGAGGAG TACAGAAAGA GATAGAATAT TTAAATACTG GTCAAGTTCT TTTGAAATAC
GAAATCCCTA TGGCTCAATT AGTTGAAGAC TTCTTTGGCC AATTGAAGGG TTGTACTAAG
GGTTATGCTT CTTTGGACTA CGAAGATGCT GGCTATAGAA AGTCTGATAT TGTAAAAATG
GAATTATGTG TCAATTCCGA GCCTCAAGAT GCATTGACCA CCATTTTGCA TAAATCTCAA
GCTCAATCTC GCGGTAAAGA ATACGTAACT CGATTCAAAA AATTTCTCAG ATTCCAATTG
TTTGAAGTTG TTATTCAGGC CAAGGTGAAC AGTAAGATCG TCGCCCGAGA GACAATCAAG
GCAAAGAGAA AAGACGTCAC TCAAAAATTG CATGCCGCTG ATATTTCCAG ATATAAGAAG
TTATTGGAAA GACAGAAGGA AGGAAAGAAA CAGATGAAGG CTGCTGGACG TGTCCATATT
GGCAACGATG CATACCAAGC TTTCTTACGT CGTAATGATT AG
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| Protein sequence | TTKKVLSTEE KKILLNKEAH RKAVQERIAD IPIRNYRNFS IVAHVDHGKS TLSDRLLELT
GVIQPGSNKQ VLDKLDVERE RGITVKAQTV SMFYNDPETG EDYLLHLVDT PGHVDFRAEV
SRSYASCGGA LLLVDASQGV QAQTVANFYL AYSMGLKLIP IINKIDLDQA DIPRAMDQVE
ETFELPREDC IPVSAKTGLN VENIIPSIIK NIPAPNGDDS KPLKALLVDS WHDPYLGVVM
LVHVVDGKMK KGMKLLSAHS DKVYEVKEVG IMYPDKMQMD QIKAGQVAYV VPGMKNPREA
LVGDTFFQYG KHEGLEALPG FEEPKPMVFL GAFPADGTEF NVMDDQMQNL VLNDRSVSLE
KETSNALGLG WRLGFLGSLH ASVFKERLEN EYGAKIILTA PTVPYKIVYR DGREEIITNP
DGFPDAKNQV NVDTYMEPYV NAIMSVPNEY VGTVMTLCLS NRGVQKEIEY LNTGQVLLKY
EIPMAQLVED FFGQLKGCTK GYASLDYEDA GYRKSDIVKM ELCVNSEPQD ALTTILHKSQ
AQSRGKEYVT RFKKFLRFQL FEVVIQAKVN SKIVARETIK AKRKDVTQKL HAADISRYKK
LLERQKEGKK QMKAAGRVHI GNDAYQAFLR RND
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