Gene PICST_60871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_60871 
Symbol 
ID4839310 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1699701 
End bp1700189 
Gene Length489 bp 
Protein Length151 aa 
Translation table12 
GC content42% 
IMG OID640390625 
Productpredicted protein 
Protein accessionXP_001385016 
Protein GI150865692 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TGGAATGAGT CCGAAATTAT CACTGATAGG AAGTCTCGTT TCCAAGCAAG ACATGTACAG 
ATAAACGATC CCAGTGAGGT GACACCAGCC CTTGACCAAT TTGTATTCCA ACATAAAAGT
ATAGTCAAAA ACGCGAGCCA TCCTCATATA ATAGCTTGGA GAACTGGTAT CCCAGAGTCT
GAGCCAATAC CCAAGTCTGA ATATTCGATA CAAGATAAAA ATAGAAGTTC CTTTTGGAAT
AGGTCTACCA GCATGTGTTC TGGCACTACC AGGTTTACTA ATGTACAGCA GGGTTATAAG
GATAATGGAG AGAAAGGAGC CGGTTCAAGG CTCTTGGAGC AGGTTTTAGT TAATAACAAT
ATCTACAATG TTCTTGTGAT AGTAACTCGA TGGTACGGTG GAAATCCCAT TGGAAGTCTG
CGGTTCCGCC ACATCGTTAA CAGCAGCTTG AACAGTCTTA GAAAGGGAAA TAGACTTGAG
AATCGATGA
 
Protein sequence
WNESEIITDR KSRFQARHVQ INDPSEVTPA LDQFVFQHKS IVKNASHPHI IAWRTGIPES 
EPIPNSFWNR STSMCSGTTR FTNVQQGYKD NGEKGAGSRL LEQVLVNNNI YNVLVIVTRW
YGGNPIGSSR FRHIVNSSLN SLRKGNRLEN R