Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_60761 |
Symbol | |
ID | 4839428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | - |
Start bp | 1441593 |
End bp | 1442399 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640390743 |
Product | predicted protein |
Protein accession | XP_001385278 |
Protein GI | 150865885 |
COG category | [S] Function unknown |
COG ID | [COG4021] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0820783 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.624062 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGT CTCGTTTTGA ATATGTCAAA CAGTTTGAAC GCGAAAACTA CCTTCTTCCA GATACATACA TAGTGATCCG GGTAGATGGG AAAGGTTTCC ACAAATTTAG CCAAGAGTAC GAATTCGACA AACCGAATGA CATACGGGCT TTAAATGTCA TGAATAGAGC TGCCCAGGCA GTTGTTGAAC TGTACAGTGA CGTACTTATG GCGTATGGCG ATTCAGACGA GTACTCCTTC TTGCTCAGAA AGAATTGCCA ATTGTACGAG AGACGTGAGA TGAAGTTGAT AACAATGTTT TCTCTGATGA TTCTGACTAA CTACTTCTAC TTTTGGAACG AAGAATTTCC GGAGAAAAAG TTGAAGCAGT CAAGATTACC TAACTTCGAC GCTCGGGCTG TATTATATCC CAACTTTGCA TTGATTAAAG ATTACTTCAG CTGGCGTCAA GTAGATTGCC ACATTAACAA TTTGTACAAT ACGACGTTCT GGGCTCTTGT CTTAAAAGGA GGGATGACTC CTCAGGAAGC TGAAAACAGG TTGATAGGCA CTGTAGCTAG CGACAAGAAT GAGATCTTGT TTCTGCAGTT TGGCATAAAT TACAATAACG AGCCGGAAAT CTTCAAAAAG GGCACGATTA TCATGAGAGA ATTGGACGAG GAAGATTCGA GAGACGAGAA GGAATTGTCG GCCAGACAGA AACAGAGAAT CGACAAGAAG AGAAAGAAGG CAGAAATCAA GCTTTTGCAC GAAGACTTGA TCACGAGCGA AACATTCTGG TCCTCGCGGC CATGGCTCTC TCTGTAG
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Protein sequence | MAKSRFEYVK QFERENYLLP DTYIVIRVDG KGFHKFSQEY EFDKPNDIRA LNVMNRAAQA VVESYSDVLM AYGDSDEYSF LLRKNCQLYE RREMKLITMF SSMISTNYFY FWNEEFPEKK LKQSRLPNFD ARAVLYPNFA LIKDYFSWRQ VDCHINNLYN TTFWALVLKG GMTPQEAENR LIGTVASDKN EILFSQFGIN YNNEPEIFKK GTIIMRELDE EDSRDEKELS ARQKQRIDKK RKKAEIKLLH EDLITSETFW SSRPWLSS
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