Gene PICST_60011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_60011 
Symbol 
ID4839283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1572371 
End bp1572766 
Gene Length396 bp 
Protein Length131 aa 
Translation table12 
GC content45% 
IMG OID640390598 
Productpredicted protein 
Protein accessionXP_001385299 
Protein GI126137551 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0228] Ribosomal protein S16 
TIGRFAM ID[TIGR00002] ribosomal protein S16 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.49204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.483859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCC CTATCAGAAT AAGATTGGCT CGCTTTGGCA GAAAGCATCA GCCTTTGTAC 
AACATTGTCG TGGCCAATAG AGGAAAAGCC CGTGATGCCT TGCCTATCGA AGTTTTGGGT
ACTTACAACC CCAACCCAGT TCCTTTGACT CCAGAAGAAA AAGCCAGTGG TACCAAACCT
TTCAAGCACA TAGAGTTGGA TTTTGATAGG TCCAAGTACT GGCTTGGTGT TGGTGCCGAT
GTTTCCGACC GTGTATCGTA TTTGTTCAAG AAAGCTGGCT TGTTACCTGA GACTTGGCCT
GCTCCAAGCA AGTTGACTCA ACATGTAGAA AGAGCCACCA CGAAAGACAT CAAGACTGTT
TATGAAGAAC CAAGAGAGTT CTTCAGAAAG AGATGA
 
Protein sequence
MSSPIRIRLA RFGRKHQPLY NIVVANRGKA RDALPIEVLG TYNPNPVPLT PEEKASGTKP 
FKHIELDFDR SKYWLGVGAD VSDRVSYLFK KAGLLPETWP APSKLTQHVE RATTKDIKTV
YEEPREFFRK R