Gene PICST_59952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_59952 
SymbolMRS2.1 
ID4839187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp476112 
End bp477314 
Gene Length1203 bp 
Protein Length400 aa 
Translation table12 
GC content43% 
IMG OID640390502 
Productmitochondrial magnesium ion transporter 
Protein accessionXP_001385103 
Protein GI150865762 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.677897 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAACT CCATCTACAA TAGATTGAAG CCGATTACTC CTAACGATCT GTATGTATCG 
TGTACCATAT TCGATTACAA CGGAAACATC ACAGCTGTGT CGAAAAAGTA TCCCAAGATG
AAGTTCTTGC GTGACAACAA TCTTTTCCCG CGTGACTTGC GAAAGATCGA TACCTCTTCT
ATAGACGTAG CTCCTTCTAT CATGGTAAGA ACTCCCAACT CTATAGTCGT AAACATGTTG
CATATCAAGG CTATTGTCAC TAAGGACACA GTCATGGTGT TTGATACGTC AACTCCATCG
ATAGCTACGC GTTTGGGGTT ATTCATGTAT GATCTTGAGA TGAAGTTGAA GCTACCAGCT
GGTAATCTCA GCTACGAATT CCGGGCTCTC GAATGTATTC TCATTAGCAT CATGAGCTAT
TTGGAGGCCG AAGTGAAATC GCATCTTTCC AGCTGTGGCC TCATCCTATC TGAATTAGAG
GACCAAGTAG ACCGTAATAA GTTGCAGGAC TTATTGATCA AGCTGAAGAA GTTGTCCAGT
TTCTACCAAA AGACTTTGTT GATCCGAGAC ATCTTGGAAG AACTTTTAGA CAACGACGAA
GACTTGGCAG GCATGTATTT GACTGAAACA AAGCAGTTCG ATCCCAAAGT TGAAAATTAC
GAGGAATTGG AGATGATCTT GGAAGCGTAC TACAAACAGT GTGACGAGTT TGTCCAACAG
GCGGGTTCTC TTCTAAACGA TATCAAGGCT ACCGAGGATA TCGTCAACAT CATCATAGAT
GCCAACAGAA ATTCGTTGAT GTTGTTCGAG TTGCAAGTAA CCATATACAC CTTGGGGTTC
ACTGTAGCTA CTTTGGTACC TGCTTTCTAC GGGATGAATC TTAAGAACTA CATAGAAGAG
TCGACCTACG GCTTTGGAGC TGTTATTGCC CTTTCAATCA TTCAAGGATT GATTGTGACT
TTTATCAACT TTCGCAAATT GCATAGAGTG CAGAAGTTGA CAATGATGGA AACAAATACC
AAGAAGATGG GGCGGCTAGC CAGTAGATTC CACCACAGCT CCAGTCCTGT GGGAACATTC
AATAAGGATA AATGGTACTA TAGACTCTTC TTTGGAACGC GCAGCACCAA CTACCATCGT
CCTACTACTA AGGAGAAGGA CGTAATCTGG CGCATGATCA ACGACGACAA ACCGTTCAGA
TGA
 
Protein sequence
MDNSIYNRLK PITPNDSYVS CTIFDYNGNI TAVSKKYPKM KFLRDNNLFP RDLRKIDTSS 
IDVAPSIMVR TPNSIVVNML HIKAIVTKDT VMVFDTSTPS IATRLGLFMY DLEMKLKLPA
GNLSYEFRAL ECILISIMSY LEAEVKSHLS SCGLILSELE DQVDRNKLQD LLIKSKKLSS
FYQKTLLIRD ILEELLDNDE DLAGMYLTET KQFDPKVENY EELEMILEAY YKQCDEFVQQ
AGSLLNDIKA TEDIVNIIID ANRNSLMLFE LQVTIYTLGF TVATLVPAFY GMNLKNYIEE
STYGFGAVIA LSIIQGLIVT FINFRKLHRV QKLTMMETNT KKMGRLASRF HHSSSPVGTF
NKDKWYYRLF FGTRSTNYHR PTTKEKDVIW RMINDDKPFR