Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_59814 |
Symbol | |
ID | 4839360 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 586128 |
End bp | 586802 |
Gene Length | 675 bp |
Protein Length | 203 aa |
Translation table | 12 |
GC content | 46% |
IMG OID | 640390675 |
Product | predicted protein |
Protein accession | XP_001384778 |
Protein GI | 150865524 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.423148 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.113274 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTCGT CGACTGTCAT CTTTGTGGCC ACGTTGGCTA TAGCGTTCAT TTTCTTGAGA TGGTTGATCG CTCCCATTCC CCAATCCAAC GAGTTTAACA TCGCTGAGGC TGCAGGAAAT ACTTCTACTG GACAAGAATC CAACAACTCT AGCAATGCCA GTAATACAGG CAATGCCAGA TCCAGAAGAA GACCGGTCAC GGACAGCATG GTCGAGGTTG TGCAGACTAT CGCTCCAGGT TTGACGCGTG ATCAAATCGT GTTCGACTTA TCTAACACAG GATCAGTTGA ACTCACCATC AACAGATACA TGGAGTTGGG CAACTTGCCC TATCCGCCAA ATTCGGCCAG AGGCACCAAC TCTGCATCAA GCAACGAAAT CCATTCGCAA TCTCAATCTC AAGCATCTTC TAGATCTGCT ACTGAAGCTA CGATGGAATC GAATTCTAGT CCTAGTCCTA GTTCTAAGAG CATTCCAAAG AAATCTATCA ACTTGCTTGA AAAGTACAAC ATCAAAGAAG AGGACTTGGC AGTTGGTGAT TCGACATCCT CATCATGGGA GGCTGATAAA TCAGAGAGGT CCGTCAGCTT GCACCGTAGA AAACAGGAAA TGATTGTCGC TGCCAGAAGA AGATTGGAGG CCCTGTTGAA AAATGAACTT GACTTGTCCC AGTAG
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Protein sequence | MDSSTVIFVA TLAIAFIFLR WLIAPIPQSN EFNIAEAAGN TSTGQESNNS SNASNTGNAR SRRRPVTDSM VEVVQTIAPG LTRDQIVFDL SNTGSVELTI NRYMELGNLP YPPNSARGTN SASSNEIHSQ SQSQASSRSA TEATMESNSS PKEDLAVGDS TSSSWEADKS ERSVSLHRRK QEMIVAARRR LEASLKNELD LSQ
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