Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_59041 |
Symbol | |
ID | 4838993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 646031 |
End bp | 647044 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640390308 |
Product | predicted protein |
Protein accession | XP_001384419 |
Protein GI | 150865271 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.778862 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCAGC TTCATGTTTG GGGTTGTGGA ACGGAAATAT CGGTCATTTC GCCAGAATGC CTTGCCGCGA GCTGGCTATT GACTGATTCC TTGTCGAATA CATCTGAAGA ATACGAAATA GTCACTTCCT CCAATACAAA TGTCTCAGAT ATAGGAAAGT TGCCAGTGCT AACGACAGCT GAAAGAAAGC TCCAGGGATT TGAGGAGATT TCCAAATACA TTTTAGAAAC TTATGGTGAT ACCAATTTCG TGTCCAAGGA ATTATCTACC CATAACCAAC TAGTCAACAA GGCATTGATA GCCAAATTGC AGTATAAAGT CGAGTATATC CACCAATACA ACATGTTTGT CAATTCCAGG AACTACGAGA AGTATACAAC GAAGCTCTTC CAGAAATACT TACCCTTTCC CATGATGTAC AACCAACCGT TGAAGTTGCA CCAGAACGCC CAGGAACAGG TTCAATTACT TGGGCTCAAC AAGAACAAGA CTGGATTCTT CGATTTTTCT GGTAGTGTGA ATAATTCTGA AATTGCAGAA ACTGAATATA TCAATGACGA AAATGAGGAA CAAGACGAGG TCGCATTGAG TGCACTTCAT GAGAGACAAC TAGTAGCAAA ATCGAAGGAA AAACTGCTTT TGAGAGAATC AAAGAATTCG TTGAAGTGCT TGCATTTGCT CAATGACTAC TTGGACTATT TCTCCAAGTT GTATGAGAAA TTGAATGGTA ATAAGAATCT GTATGGATTC ATATTCGACC AGAAAAGAGC AAGTTCATGC GAAATACTCT TGTGTGCTTA CGTGTATTCA TTGACTTATG AGGACTTACC TGACAGATTT ATCTATAACT ACTTGAAGAT TAAAAGACCT GACTTTACAG AGTTCATTGC TACATGCACC CAGAGATGGA ATACCCAATT GCAGATAGAA GATGCGGTCA GAGGTCCTGA AAACGAGGAA ACACCCAGCT TGTGGAACGA GGTCAAGTAC CAGACTGGAA TTGTACATTA CTAA
|
Protein sequence | MIQLHVWGCG TEISVISPEC LAASWLLTDS LSNTSEEYEI VTSSNTNVSD IGKLPVLTTA ERKLQGFEEI SKYILETYGD TNFVSKELST HNQLVNKALI AKLQYKVEYI HQYNMFVNSR NYEKYTTKLF QKYLPFPMMY NQPLKLHQNA QEQVQLLGLN KNKTGFFDFS GSVNNSEIAE TEYINDENEE QDEVALSALH ERQLVAKSKE KSLLRESKNS LKCLHLLNDY LDYFSKLYEK LNGNKNSYGF IFDQKRASSC EILLCAYVYS LTYEDLPDRF IYNYLKIKRP DFTEFIATCT QRWNTQLQIE DAVRGPENEE TPSLWNEVKY QTGIVHY
|
| |