Gene PICST_59041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_59041 
Symbol 
ID4838993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp646031 
End bp647044 
Gene Length1014 bp 
Protein Length337 aa 
Translation table12 
GC content40% 
IMG OID640390308 
Productpredicted protein 
Protein accessionXP_001384419 
Protein GI150865271 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.778862 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCAGC TTCATGTTTG GGGTTGTGGA ACGGAAATAT CGGTCATTTC GCCAGAATGC 
CTTGCCGCGA GCTGGCTATT GACTGATTCC TTGTCGAATA CATCTGAAGA ATACGAAATA
GTCACTTCCT CCAATACAAA TGTCTCAGAT ATAGGAAAGT TGCCAGTGCT AACGACAGCT
GAAAGAAAGC TCCAGGGATT TGAGGAGATT TCCAAATACA TTTTAGAAAC TTATGGTGAT
ACCAATTTCG TGTCCAAGGA ATTATCTACC CATAACCAAC TAGTCAACAA GGCATTGATA
GCCAAATTGC AGTATAAAGT CGAGTATATC CACCAATACA ACATGTTTGT CAATTCCAGG
AACTACGAGA AGTATACAAC GAAGCTCTTC CAGAAATACT TACCCTTTCC CATGATGTAC
AACCAACCGT TGAAGTTGCA CCAGAACGCC CAGGAACAGG TTCAATTACT TGGGCTCAAC
AAGAACAAGA CTGGATTCTT CGATTTTTCT GGTAGTGTGA ATAATTCTGA AATTGCAGAA
ACTGAATATA TCAATGACGA AAATGAGGAA CAAGACGAGG TCGCATTGAG TGCACTTCAT
GAGAGACAAC TAGTAGCAAA ATCGAAGGAA AAACTGCTTT TGAGAGAATC AAAGAATTCG
TTGAAGTGCT TGCATTTGCT CAATGACTAC TTGGACTATT TCTCCAAGTT GTATGAGAAA
TTGAATGGTA ATAAGAATCT GTATGGATTC ATATTCGACC AGAAAAGAGC AAGTTCATGC
GAAATACTCT TGTGTGCTTA CGTGTATTCA TTGACTTATG AGGACTTACC TGACAGATTT
ATCTATAACT ACTTGAAGAT TAAAAGACCT GACTTTACAG AGTTCATTGC TACATGCACC
CAGAGATGGA ATACCCAATT GCAGATAGAA GATGCGGTCA GAGGTCCTGA AAACGAGGAA
ACACCCAGCT TGTGGAACGA GGTCAAGTAC CAGACTGGAA TTGTACATTA CTAA
 
Protein sequence
MIQLHVWGCG TEISVISPEC LAASWLLTDS LSNTSEEYEI VTSSNTNVSD IGKLPVLTTA 
ERKLQGFEEI SKYILETYGD TNFVSKELST HNQLVNKALI AKLQYKVEYI HQYNMFVNSR
NYEKYTTKLF QKYLPFPMMY NQPLKLHQNA QEQVQLLGLN KNKTGFFDFS GSVNNSEIAE
TEYINDENEE QDEVALSALH ERQLVAKSKE KSLLRESKNS LKCLHLLNDY LDYFSKLYEK
LNGNKNSYGF IFDQKRASSC EILLCAYVYS LTYEDLPDRF IYNYLKIKRP DFTEFIATCT
QRWNTQLQIE DAVRGPENEE TPSLWNEVKY QTGIVHY