| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_58903 |
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| Symbol | GAL83 |
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| ID | 4838510 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 1081065 |
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| End bp | 1081865 |
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| Gene Length | 801 bp |
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| Protein Length | 249 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640389825 |
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| Product | Glucose repression protein GAL83 (SPM1 protein) |
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| Protein accession | XP_001384510 |
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| Protein GI | 150865338 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0305354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.109445 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | AACATCACGG TTCCTGTAGA CATAAAGTGG GTCCAAGGTG GAGAGAAAGT GTACGTTACA
GGGTCTTTCA CAGGCTGGAG AAAAATGATT GGTCTCTCTA AGCAACCAGA TAACTCCTTC
CTTATCACTT TGGGCCTCCC AGTGGGTACT CATCGCTTTA GATTTGTCAT TGACAATGAA
CTCAGATTTT CAGATTTCTT GCCAACTGCA ACTGATCAAA TGGGTAACTT TGTCAATTAT
GTGGAAGTGA CTCCCGAGCA TATCCAGCAA CATTTATCAC TGCTCGAGGA CCAAGAGGCG
GTCGATGAGC TGCAGCATGT GCATGAGCAG CCTTCTCAAG CATCCAGTCG TAAGTCTTCT
GTTTCTCGTG GAAGAACTGA TTCCATGTGG AGATTAACCA ATGACGACGA TGATATGGGA
AATGGCTATT CACGATATCA CGATGAAGAT AATGCAACAA ACGAAAAGAA TTATCAATTC
ATAAATGATA TTCCTCCAAT TTTCACTGAC TCCAAGGTTA TGGAACAGTA TTACATTGCG
ATAGATAAGC AATCAAAGTC CAATGGACAA CAGCAAGCTT GGCTCCACCC TCCACAGTTG
CCTCCTCATT TGGAAAATGT CATCTTAAAC AATTACAACT CCTCCGATAG AGATAATAAC
GGTGGTGCCT TGCCAATTCC AAACCATGTG GTGTTAAATC ATTTGGCAAC TACTAGTATC
AAGCATAACA CATTGGCTGT GGCATCTGTG GTAAGGTATA AAAGAAAGTA TGTTACTCAG
GTTTTGTATG CTCCATTGCA A
|
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| Protein sequence | NITVPVDIKW VQGGEKVYVT GSFTGWRKMI GLSKQPDNSF LITLGLPVGT HRFRFVIDNE
LRFSDFLPTA TDQMGNFVNY VEVTPEHIQQ HLSSLEDQEA SSVSRGRTDS MWRLTNDDDD
MGNGYSRYHD EDNATNEKNY QFINDIPPIF TDSKVMEQYY IAIDKQSKSN GQQQAWLHPP
QLPPHLENVI LNNYNSSDRD NNGGALPIPN HVVLNHLATT SIKHNTLAVA SVVRYKRKYV
TQVLYAPLQ
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