| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_58067 |
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| Symbol | UMH1 |
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| ID | 4838347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 1828322 |
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| End bp | 1829203 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640389662 |
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| Product | degradation of aromatic compounds |
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| Protein accession | XP_001383961 |
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| Protein GI | 126134873 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCTA CTTGGAAGAG ATTAATTAGA TTCGTCGCTC AAGACGGAAA GACCTATAGA
GGTGAACCTA TTGTCTCTGA TGCTGACTAC GATGTTGGCA AGCAATTCTT GCAAGGTAAA
CAGATCATGG CCAAGGTTAT CACTGGTGAT ATCTTTGATA ATGCTGTTGT GACTGATGTT
ATCAAGGAAG TAAAGACTTT GTTGGGTCCT CTTACTCCCG ATGATGTTCC CATGGTGAAG
TGTGTAGGTT TGAACTTCAT GAAACACATC CAGGAAGGTG GCAGAACCCC ACCACCATTC
CCATCCATTT TCTACAAGAC AAGTTTCAGT GTTGCAGACT TCGGAGAAGA CATTCCAATT
CCTAAGATCG CTCAATCCAA ATGTGATTAT GAAGGTGAAT TGTGTATTGT TATTGGCAAG
ACCGGAAAAA ATATCAAGGA AGAAGAAGCA TTGAGTTATG TTGCTGGTTA TGTTACTGGC
AACGATGTGT CTTCCCGTAA CTGGCAGAAG GACCCAGAAT TCGCCGGAAG TGTTCCTCAA
TGGTGTTTCT CTAAGAGTTT CGACAAGTAC GCTCCATTGG GTCCAGCCTT GGTTTCACCA
CAAGTGATTC AAAATCCAGG AAACCTTAGC CTACAAACTA CCGTTAACGG CGAAATACGT
CAAGATGCCA ACACTGACGA TCTTTTGTTT GGAGTTCCAA GAATCATTTC CTTCATTTCG
CAAAGCACTA CATTGGAAAT GGGAACTGTC ATCATGACCG GAACTCCAAG TGGTGTTGCG
TTAGGTATGA AGCCAACCCC TGTGTATCTT CAAAACGGAG ACGTTGTTGA GGTAGCTATT
GATCAAATCG GCACACTTTC TAATAAAATG GTGTTCGAAT AA
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| Protein sequence | MTPTWKRLIR FVAQDGKTYR GEPIVSDADY DVGKQFLQGK QIMAKVITGD IFDNAVVTDV
IKEVKTLLGP LTPDDVPMVK CVGLNFMKHI QEGGRTPPPF PSIFYKTSFS VADFGEDIPI
PKIAQSKCDY EGELCIVIGK TGKNIKEEEA LSYVAGYVTG NDVSSRNWQK DPEFAGSVPQ
WCFSKSFDKY APLGPALVSP QVIQNPGNLS LQTTVNGEIR QDANTDDLLF GVPRIISFIS
QSTTLEMGTV IMTGTPSGVA LGMKPTPVYL QNGDVVEVAI DQIGTLSNKM VFE
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