Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_57730 |
Symbol | |
ID | 4838333 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 110272 |
End bp | 111123 |
Gene Length | 852 bp |
Protein Length | 265 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640389648 |
Product | predicted protein |
Protein accession | XP_001383300 |
Protein GI | 150864473 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.10969 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCCTT CGATACTGGA GGTCCGAGCT TCGCAGTCTA AAATCAACGT CTATTTAGAT GAGTTGAACT CGAATCTCGA GGAAAGGGAC CGGTTAGTAG AGGTTTTACG GCTAACTCCT TCTGCAAACG ATAACTACGA GCTAATCAGC CTACTCCAGA AACTCGTCAA ATACTTCAAA TATCTCCAAC AGGACCTCAT ATCGTTGATC AAGGTAGGAG AGAATGTCGA ACAGTACATA AATCAGTTCC GGGAAGCTGT AGCCAAATAT GAAGACGTGC ACGAGAAACT CGCAGGGGAC TCTTCAATCA GTGTATCCGA ATACCATTTC ACGCCCGCAG AATTTCCACA AAGAAAGACC CCCATTTCAG TTATCAGTGG GTCTGGAGCT GCCCGTGAAG TTCTGAAGTC CGTGCGCTTT CAGGAGGACA TTTTAGATAA GGATGCTGAC GATCATTTCC GTAACGAGTT GATGGGAACA AGAAATTTCA AGCCTTATTC GGACGAGGAG TCTTCTAACA ACACAGATTC TGAGTCGTTC GATGCCCAGA CGAACCAACA TCTTTTTGCT CAACACCAAC AGACTATTCT AGAACAAGAT CAGAGTCTAG ATGTGCTCCA CCAGCTGATT ATTAGACAGC ATACCATGGG CCAGAGCATT AACTCGGAGC TCGATGACCA TCTCATTCTC CTCAACGACT TGGAGAATGG TGTTGATGAT GCCAATTACC GTTTGAATAC CGCTGCCAAT CGGTTGCATG AATTCCGGAA ACGGGTTCGT GAAAACGGTA GTTTGGTCAC AATCATTGTT CTCACAGTGA TCTTGATAAT GTTATTGGTG GTGTTGAATT AG
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Protein sequence | MAPSISEVRA SQSKINVYLD ELNSNLEERD RLVEVLRLTP SANDNYELIS LLQKLVKYFK YLQQDLISLI KVGENVEQYI NQFREAVAKY EDVHEKLAGD SSISVSEYHF TPAEFPQRKT PISSVRFQED ILDKDADDHF RNENFKPYSD EESSNNTDSE SFDAQTNQHL FAQHQQTILE QDQSLDVLHQ SIIRQHTMGQ SINSELDDHL ILLNDLENGV DDANYRLNTA ANRLHEFRKR VRENGSLVTI IVLTVILIML LVVLN
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