| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_57236 |
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| Symbol | PRP2 |
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| ID | 4837784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 879964 |
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| End bp | 880863 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640389099 |
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| Product | methylisocitrate lyase (2-methylisocitrate lyase) |
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| Protein accession | XP_001383450 |
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| Protein GI | 126133851 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.703646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAGCTA AAAGGCTTTT GGAATTAATT GAAGCTCCAG ATTTATTGGT TTGTCCTGGA
GTTTTTGATG GTATCACTAC AAGAATTGCC CACAGGCTAG GAGCAAAATG TCTATATATG
ACAGGTGCCG GAACAGTAGC TTCAAGGTTG GGAATGCCAG ATCTAGGTAT TGCAAACTTG
AACGATATGC ATGAAAATGC ACACATGATT AGTGGTATCG CCGGCGATAT TCCTGTTATT
GCTGATGCTG ATACAGGGTA TGGAAATAGT ACCGTGTGTG CACGAACATT AAACTTCTAT
TCTCGAGCTG GCGTTGCAGC TTTGCATGTT GAAGATCAAA TACTCTCCAA GAGATGTGGT
CACTTGTTGG GCAAGGAATT GGTGAGTGGT GAAGAATTTA CTTCCAGAAT ACATGCAATG
GCTATCGAAA GGAAGAGAAT TGGATCTGAC ATTCTTATTA TTGCAAGAAC TGATGCTCTA
CAAGAATTTG GATTGGAAGA AGCTTTGAAG AGAATCAAAT CTGCCATTAG TGTAGGTGCA
GACATTGCGT TCGTTGAAGG AATCAAGGAC GAGCAACAAG CTAAGGCAGT TGTGGCAGCT
CTCGCCCCAA CTCCTGTGTT AATTAATTTA GTCCCCAACG GTTTAACTCC AAACTGGAGT
ACAAAAGAAG CTCAAGATTT GGGATTCAAG TTGGCATTGT ATCCAGGTGT ATGTTTAGGT
CCTATTGCAG TTGCCACCCA AAAGTCTATT AAGAATCTTT TTGAAACGGG TAAGCAGATT
GAATTGCAAA ATAACGAAAC AAAAGCTGAT CCACGGGAGT TTTTCATAAC AATGGGTCTA
GAAGAGGTTG TGAAACTTGA CAAAGAAGTT GGAGCAAATT CCACAACAGA TATCATCTAG
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| Protein sequence | MSAKRLLELI EAPDLLVCPG VFDGITTRIA HRLGAKCLYM TGAGTVASRL GMPDLGIANL
NDMHENAHMI SGIAGDIPVI ADADTGYGNS TVCARTLNFY SRAGVAALHV EDQILSKRCG
HLLGKELVSG EEFTSRIHAM AIERKRIGSD ILIIARTDAL QEFGLEEALK RIKSAISVGA
DIAFVEGIKD EQQAKAVVAA LAPTPVLINL VPNGLTPNWS TKEAQDLGFK LALYPGVCLG
PIAVATQKSI KNLFETGKQI ELQNNETKAD PREFFITMGL EEVVKLDKEV GANSTTDII
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