| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_57202 |
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| Symbol | |
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| ID | 4838188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 1222154 |
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| End bp | 1224373 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640389503 |
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| Product | predicted protein |
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| Protein accession | XP_001383863 |
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| Protein GI | 150864868 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1928] Dolichyl-phosphate-mannose--protein O-mannosyl transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0669356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTATT CCGAGAAGCC CTACCAGTTG CCTCCCGGTT ACAAGGTCGG AAGTCGCCGT
GTTTACCACA GCACCGAAAG GGAGCCTAGT CGAATTTCAG GGACTGTTCT CACAAAATTC
GACCACTTCC TTATAGCAGT GCTACTTCTG GCTTCAGTGC TAGTTAGACT ATATAAGCTA
CCATTTCCTA CGAGGGTGGT CTTCGACGAA GTTCATTTTG GAGGCTTTGC TAAGGATTAT
TTTGCGGGCG AATTCTTTTT AGATGTCCAT CCACCGCTCG TCAAGCTCAT CTACTATTGG
ATCGCTGTTC TTTTCGGCTG GAATGGCCAG TTCACGTTTG AAGAAATTGG AAACTTATAT
GATAAAGATG TCCCATATGT TATCATGAGG TTATTTCCGG CCTTGTGTGG CATTTTCACT
GTCGTATTGA CGTTTTTGAC ACTTCGCTTG ACCAATTGCA GATCTTTTGT GGCCCTTTTT
GGAGCGTTTT TGGTTCTTAT CGAGAATTCT CTTGTAACAC AGTCCAGATT CATCTTGCTT
GACAGTCCGC TTTTGTTTTT TATGTCTATT TCGATCTACG GACTCATGAA GCAAAGAGTG
TGCCAGCCAT TCACTAAGCA ATGGTTCAAA AGCTTGCTAT TAGCAGGTAT GGGTCTTGGA
ATGACAGTTT CCACAAAACT CACAGGACTT TACACTATCG CCTGGGTGGG CTTATTGACG
ATTGTTGAAC TCTGGGATTA CTTGGGCGAC TTAAACGTAA CAATGAGACA ATGGTATACC
CATTTTGCAG CTCGGTTTGT AGCCCTTGTG TGCGTTCCTG TGACTATCTA CCTTTCTGTA
TTCTACCTTC ATTTCCTCAG CTTGCCATTC AACGGCAGTG GCTCCGGAGC CATGAGCCCA
ATCTTCAAAT CAACATTGCT TGATTCGGAT TTCCTTACCA ACGAACCAGT GGAAGTATCC
TACGGAAGCA CGGTGACTAT AAAACACAAC AACTTGGAAG AATACCTTCA TTCACACGAT
CACAATTATC CTGGAGGGAG CCAGGAACAA CAGGTTTCTC TCTATGGGTT CAGTCCTGAT
GAAAATAACG AGTGGATCAT CGAAACGAAG AACAAGGCAA GAGAAGGACA ATTGCAAAAG
AATTTCAAAG CAGTTCTTGA TGGCGATACT ATCCGATTAT TCCACAAACA AACAGGAAAA
TATTTACATG TAAACGATAT CAGACCTCCG ATTTCTGAGC ACGACTACTC CAATGAAGTG
TCTTGTAGTG GTTCTAGAGA ACTTCTTGGT GACATCAACT ACGAGTTCAA GGTCCGGATC
ATGAACAAGA AGCCCCATTC ACAGAACAAT TTGCCTATGA TCAAGTTAAG AGCTACGGAA
TCGATTTTCC AATTAGTTCA CCATGGAACC AAGTGTGTGA TGATGAGCCA TCTGGACAAA
CTTCCCAATT GGGGCTTTGA ACAGAACGAA GTTTTGTGTG TTGATGAGCC TACAATTCCT
AACACTTTGT GGTACATTGA AGAGAACTCA CATCCTGTTC TCGACAACAG CACCGTTCAC
CCAAGAGTAC ATTTCACCCC ATTTGGATTT TTCAGCAAGC TCTGGGAGTA TCTGAAAGCG
ATGGTCAGAA TCAACAGCAC ATTTAAGTCG GAACATGTGT ATTCTTCTCG TCCTGAGTCT
TGGCCCTTTG TCATGAGAGG AATCAGCTTT TACAGCAACG AGAATGAGAA TAAGTTAACA
GACGAACAAG GTAGCCATGT ATATTTGTTG GGCAACATGG CCATCTACTG GATCGGATTC
TTTATCATCA CATTAGGAAT GGCAAAGCTC TTTTTCTACT ACTTGAAGCA TTTAAACCCA
TTCGTCATAA CCGGAGAAAC ACTCAGTTCT AGTGTGTTTT ACCAGTTTTG CTTTGAGTTT
ATCCTCGGAT GGCTCCTACA CTACTTCCCA GCATTCTACA TGAAGAGACA ACTCTTTATG
CATCATTATC TTCCAGCACT TTACTTTTCG ATTCTTTTGA TTGCACAGTT TATAGAATAC
CAGATTTCGA AGAGACGCTT AACTGGATAC TTACTCATGG TTGCAACAGC TGCAATGGCA
GGTTACTGCT TTTGGGCATT TGTACCAATC ATATACGGCA CTGATTGGAC ACGAGCTCAG
TGCAACCACG CAAAATGGTT TTCGTCCTGG GACTTTGATT GCATGACATA TACTAAATAG
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| Protein sequence | MSYSEKPYQL PPGYKVGSRR VYHSTEREPS RISGTVLTKF DHFLIAVLLS ASVLVRLYKL
PFPTRVVFDE VHFGGFAKDY FAGEFFLDVH PPLVKLIYYW IAVLFGWNGQ FTFEEIGNLY
DKDVPYVIMR LFPALCGIFT VVLTFLTLRL TNCRSFVALF GAFLVLIENS LVTQSRFILL
DSPLLFFMSI SIYGLMKQRV CQPFTKQWFK SLLLAGMGLG MTVSTKLTGL YTIAWVGLLT
IVELWDYLGD LNVTMRQWYT HFAARFVALV CVPVTIYLSV FYLHFLSLPF NGSGSGAMSP
IFKSTLLDSD FLTNEPVEVS YGSTVTIKHN NLEEYLHSHD HNYPGGSQEQ QVSLYGFSPD
ENNEWIIETK NKAREGQLQK NFKAVLDGDT IRLFHKQTGK YLHVNDIRPP ISEHDYSNEV
SCSGSRELLG DINYEFKVRI MNKKPHSQNN LPMIKLRATE SIFQLVHHGT KCVMMSHSDK
LPNWGFEQNE VLCVDEPTIP NTLWYIEENS HPVLDNSTVH PRVHFTPFGF FSKLWEYSKA
MVRINSTFKS EHVYSSRPES WPFVMRGISF YSNENENKLT DEQGSHVYLL GNMAIYWIGF
FIITLGMAKL FFYYLKHLNP FVITGETLSS SVFYQFCFEF ILGWLLHYFP AFYMKRQLFM
HHYLPALYFS ILLIAQFIEY QISKRRLTGY LLMVATAAMA GYCFWAFVPI IYGTDWTRAQ
CNHAKWFSSW DFDCMTYTK
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