Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_56797 |
Symbol | |
ID | 4838071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 1302218 |
End bp | 1304830 |
Gene Length | 2613 bp |
Protein Length | 870 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640389386 |
Product | predicted protein |
Protein accession | XP_001383878 |
Protein GI | 150864879 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.102052 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GAGAATAGCG ACGACGAGAC GACTTCGACG CTTATAGGAG ATAACGACCT TGCAGCAGCT CTATCGGGCA GCAATCCAGC CAGTTTGATG TATATTCCAC ACGAAGGAAG ATTTGCCCAC GATTCCTCAA CGCTCATAGA GGGACAGTCT GGAGAGGGTG GCTCCAACTC AGCTGCAAAT TTCCTAAACA AGTCTAGAAA GCTGCTGCGC TCGCAAGCTT TAAATTCGTC GATCCAGCAG CTACGTTACA ATGAAAATAA GATCGCGTTG GATAGGTCTA TCAACCAGAC AATAGACTTG ATGTATGAGC TCTCCAATGA GAACAAAGAA AGACCCATTT TCTATCCCAC TGATGTCGAG GACGAAAACA ACATCTTGCT CAACTCAACC AAAGCACACT TGGCCTTGGT GAGAAATAGC AGCTCGTTGA AGACGATCAG TAAAGAAAAG ATTCTAGGCG ACGACGATGT AGATGTAGAG AAGTTGCCTG AGTTCAAGAT CTTGAAATTG AATATCAAAA TCGGCCACAA CAGTCTGTCC GCTGATAACA TTGTTGCCAA CTTAGACAAG AAGTCTATAG CCAAGTTATT GGAGAAGAAG ATTACCCACC AAGTAAACTA CTTGTTGAAC TTGAAGGATA GAATAGATGA TACTTCTTCG AAGGTGTTTG TCACAGGAGA TTTGAATGCT GGAAAGTCGA CTTTTTGCAA CGCCTTGTTG AGAAGAAAGA TCTTACCGGA AGACCAGCAG CCATGTACAT CTGTATTCTG CGAAGTAATT GATGCCTCGC GAGAAAATAG AAGCGTAGAA GAAGTACATG CGGTTCCTAT TGGTAAAGAC TATAACATCA GGGACGAGAG CACCTATGAG ATTCATCCTT TGAAAGCTTT GGACGAACTC GTCTACGATT GTGATAGATA CAGCTTGTTA AAGGTGTATG TTCTTGACAA CCGTTCGTTT CAGGAGAGTT TGCTACACAA TGGCATTATA GACATCAAGT TGATTGACGC ACCGGGCTTG AATATGGATC TGTACCAAAC TACTCAGGTG TTTTCGAGAC AAGAGGAGAT TGATTTGGTG GTTTTTGTAG TCAATTCAGA AAACCACTTC ACCTTGTCAG CAAAAGAGTT CATTGCTGCT GCTGCTGCTG AGAAGAGATA TGTCTTCATT GTAGTGAATC GTTTCGACAA CATCAAGGAC AAGGAAAAGT GTAAGAAGAA GATATTGGAT CAGGTTAAGA GCTTGTCGCC TGATTCATAT AAGAGCGCCG AAGATTTTGT GCATTTTGTA AGTTCGTCAG AAATATTTAA CGATGGAGAC GGACCTGGTG ATGATGATGA CCCCAACGAA GACGAACGTG ACTTCAACAA TCCTGACTTT GATCATCTAG AGGCGTCTTT AAGAAAGTTT ATATTGGATA AGAGATCCAT TTCCAAGTTG TTACCTGCTA AAAGTTATTT GCTCAATCTT TTGAATGATT TGGAGACGTT ATCAAAGCTC AACGAGAAGG TGTATCTCCA GGAAATGGAC GACAAGGTGA AGGACTTGAA CAACCAAGTA GCCCCTAAAT ACAACGAGAT AATGACTAAG CAAGCTAAGA TTGGCGATAT GATCAACAGT TTGATTGAAC TTACCTGCAA TGATATCTAC AACCTGTCCA AGAAAGAGAT CTTGAATGTT GTGAATCAGC TAGGAGATCA GCAGGTTGTG CCTTATCAGG GCTTACAATA TTTGTTCGAA TATGCCAGGG CCACTCAAGA AGTTATGATC AACCAGATAT TGGCAAGTGT TCAGACTTGT GAAAACAAGG CTAAAGACAT TACTAGTGCC AAGGTTGAAG AAATCATCAA GTTTGGACAG AACACGTTAG GAGAAGAATT CTTAAATGAT AAAGTCTTCA GGTCAGACTT GATGTTCACC AGAAAGCGTG ATTCTGTTGA AAGACAATTG CACAATCTGA TTGAGTTTAG CGATTTCTTT GATCCATCAT GGGAATCTTG TTTGGTATGG TTAGGAATAC CAAAAGAATA TGTGTCTGCT ACCAGACAGC AGATCGATTA CTTCAATCCT GTAACGGCCT TGTCCAGCAT TCCAACAAAC GTGGTTGCAT TGAGAGACCA ATTGCCTACT CAGATAACCT TACATACCCT TTACAATTCA GGTAAGATTT TGACTACGGG TGCTTTGATC AGAAAGATGT ATGACTTTTC ATCGTTGGTT ACACCCTCCG TTGTGAAAAA GATTGCTATC CCTGTAGTCA TAGGTATTTC TGGTTTTTCC ATATACTACT TGATCAGCGA CATGCCCAAT GCATTCCCGC GTAAACAAGC AAGAAGAATC AAGAAACAAA TATTTGAGTT GGACTATCCC CACCACAACT CAAACAGAGT AGCCAATGAG TGCCGGTCAG TCTTGAGTTA TCCTTCAAGA CAGGTTATGA ATAACTTCCA GACTAGCTTG GATAAGAGAG CCATTGAGAA GGAGAACTTG GAAAAAGAGA TCAAGAACGC CGAATTAAGT TCAGGCTACT TCCATGCTCT TCTAGGCAAG ATTAGCTACC AACGTCAATT GATCAATGAC ATTGATTTGG AAAGCGTCTA CACTGTTGAC TGA
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Protein sequence | ENSDDETTST LIGDNDLAAA LSGSNPASLM YIPHEGRFAH DSSTLIEGQS GEGGSNSAAN FLNKSRKSSR SQALNSSIQQ LRYNENKIAL DRSINQTIDL MYELSNENKE RPIFYPTDVE DENNILLNST KAHLALVRNS SSLKTISKEK ILGDDDVDVE KLPEFKILKL NIKIGHNSSS ADNIVANLDK KSIAKLLEKK ITHQVNYLLN LKDRIDDTSS KVFVTGDLNA GKSTFCNALL RRKILPEDQQ PCTSVFCEVI DASRENRSVE EVHAVPIGKD YNIRDESTYE IHPLKALDEL VYDCDRYSLL KVYVLDNRSF QESLLHNGII DIKLIDAPGL NMDSYQTTQV FSRQEEIDLV VFVVNSENHF TLSAKEFIAA AAAEKRYVFI VVNRFDNIKD KEKCKKKILD QVKSLSPDSY KSAEDFVHFV SSSEIFNDGD GPGDDDDPNE DERDFNNPDF DHLEASLRKF ILDKRSISKL LPAKSYLLNL LNDLETLSKL NEKVYLQEMD DKVKDLNNQV APKYNEIMTK QAKIGDMINS LIELTCNDIY NSSKKEILNV VNQLGDQQVV PYQGLQYLFE YARATQEVMI NQILASVQTC ENKAKDITSA KVEEIIKFGQ NTLGEEFLND KVFRSDLMFT RKRDSVERQL HNSIEFSDFF DPSWESCLVW LGIPKEYVSA TRQQIDYFNP VTALSSIPTN VVALRDQLPT QITLHTLYNS GKILTTGALI RKMYDFSSLV TPSVVKKIAI PVVIGISGFS IYYLISDMPN AFPRKQARRI KKQIFELDYP HHNSNRVANE CRSVLSYPSR QVMNNFQTSL DKRAIEKENL EKEIKNAELS SGYFHALLGK ISYQRQLIND IDLESVYTVD
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