| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_56782 |
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| Symbol | |
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| ID | 4838173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 476805 |
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| End bp | 478688 |
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| Gene Length | 1884 bp |
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| Protein Length | 628 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640389488 |
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| Product | predicted protein |
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| Protein accession | XP_001383367 |
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| Protein GI | 150864521 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GATACAGTCA AATGTCCAAT TTGCAATTAC AATATCACGT ACTATGCCAT TGATGACAGA
ACTAGACACG TCGATTTGTG TCTTCAGAGA TTAAGTCTTG AAAGCAATCC ATCAAAGACT
CAAGAATCAT TGCCTAAAAG ACGTAAGAAA GCAGAGCCGG CCATATTGAA AGAGAAACTC
CGTTATGTGA ACGATATTAC TTCTGGGGAT GTATCTTCAA ATGTAGAAGT GGAGCGAAAA
CCAGCCACCG AAAGTATAGA GATCTTGGAT GCAACTGTAG CAACTCCCAA AGTAAAACAA
ATAAAGCCTC CTACAAAGAT CATTAACTCG AAGCAGAGGA ATCCAATACC GACACTCAAA
ACATTGTCTT TTCCAGTAGA CTCTTGCAGC AGCTACGAAG TGTCAGTCGA TGCATTTTGT
TACGCTCCAC ATGCTACCAT AGACCAGTAT TTCTTGACGC ATTTTCATTC GGATCACTAC
GGTGGGATAT CCAAGAAGTG GAGTTACGAA AGAGTATTTA AAGAAGACAC AGACTTCGAC
AATGATTCCA AGTATAGAAG AATCATCTAT TGCACCAAGA TCACTGGTGT CTTATTGACG
CGTTGTTTCA GCGTGGATCC TCGTTTCATA AAGCATTTGG AAATGGAGAC AAGGTACATA
ATAAAATCGT TCGTAGACAT GACTCAAGGT ACATCATATC TTCAAGATGG TGGATTCCCA
TCACAGAAGT GCGACCCTGG TCTATATGTA ACTCCTATAA CTGCCAACCA TTGTCCTGGA
TCGGCCATTT TTCTCTTTGA GTCCTACGGA GTAGATGGAA GCTATCGAAC AATACTTCAT
TGTGGAGATT TTCGTGTCAA TGAAAGCATC TTGAAGCATC CCTTATTGTA CAGATTCAAT
ATTGAAAATG AGAACTCGAT ACCGTTAGAC AAGGTCTACT TAGATACAAC CTACATGGCT
CCAGAATACA ACTTTCCTAA ACAAGAATTG GTTTGTGAGA CTATCGGCGA GTTATTCTAC
GATCTCATCT ACCAAGAAAA CGTCGACGAA ACACTATCCT CGAATTCCTT GTTCTCTAAT
TGGTTTGGTG TATTTACACA ATCCAGGATC ACTGACTTCT GGAAGACTGG CTCTTCACAG
TCTATGAGCA AGAAGAAGAA ATTTTTGATC CTTGTTGGGA CGTATCTTAT TGGAAAGGAA
CGCCTTGCAA TAGCCATTCT GAAGCGATTG AACTGTCCCA TTTATGTTCT GACGATAAGC
AGTAGAAGAG ATAAAATCGA AATCGTAAGG TCCTACGAAG ACGAATATCT TAATTCTGTA
CTAATAGAAG ATGACTTGGC ATTGCAAAGT AAAGCTGAAT GTGTAGTTCA TTTGGTGCCC
ATGAAAATTG TTTCGTCGGC TACCGAATTA TCAAACTACT TCAATTACAA CAAATACTAT
GAGCACTTTG AACGATGTGT AGGATTACGT CCTACGGGTT GGAGCTTTGT TCCTGGAAGT
CGGGGAATTG ATGCTTCAGT GGCTGATGAA GAGCTCGAAG GAGAGTTAAC AATAGACAAC
ATCAATCCAG ATTCAAACCA CCTTTCACAA CTACTTAGCT TGATGACTTT AAAACCTCAG
TACTCATACA TGAGAGATAT TTTGCCCCAA GCTCCATTAC CCAGAGCTGT ACGCAAACAA
AAAGCTGCAC CTGATAAATC GTTGTATAGA ATCTATTCTT TGCCGTACAG TGAACATTCT
TCGTTTCGAG AATTGGCATA CTTTTCAATT TTCTTCAACA TAAAGCAAAT TATCCCCACG
GTTAACGTCC ATAACTCAGA GTCGATTCGT CTCATGAAGG GCATAATAGA CACCTGGGAG
CAGGCCCGAG AACTCAAACT AAAC
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| Protein sequence | DTVKCPICNY NITYYAIDDR TRHVDLCLQR LSLESNPSKT QESLPKRRKK AEPAILKEKL
RYVNDITSGD VSSNVEVERK PATESIEILD ATVATPKVKQ IKPPTKIINS KQRNPIPTLK
TLSFPVDSCS SYEVSVDAFC YAPHATIDQY FLTHFHSDHY GGISKKWSYE RVFKEDTDFD
NDSKYRRIIY CTKITGVLLT RCFSVDPRFI KHLEMETRYI IKSFVDMTQG TSYLQDGGFP
SQKCDPGLYV TPITANHCPG SAIFLFESYG VDGSYRTILH CGDFRVNESI LKHPLLYRFN
IENENSIPLD KVYLDTTYMA PEYNFPKQEL VCETIGELFY DLIYQENVDE TLSSNSLFSN
WFGVFTQSRI TDFWKTGSSQ SMSKKKKFLI LVGTYLIGKE RLAIAISKRL NCPIYVSTIS
SRRDKIEIVR SYEDEYLNSV LIEDDLALQS KAECVVHLVP MKIVSSATEL SNYFNYNKYY
EHFERCVGLR PTGWSFVPGS RGIDASVADE ELEGELTIDN INPDSNHLSQ LLSLMTLKPQ
YSYMRDILPQ APLPRAVRKQ KAAPDKSLYR IYSLPYSEHS SFRELAYFSI FFNIKQIIPT
VNVHNSESIR LMKGIIDTWE QARELKLN
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