Gene PICST_56695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_56695 
Symbol 
ID4837847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp105513 
End bp106370 
Gene Length858 bp 
Protein Length285 aa 
Translation table12 
GC content42% 
IMG OID640389162 
Productpredicted protein 
Protein accessionXP_001383653 
Protein GI150864712 
COG category[S] Function unknown 
COG ID[COG1590] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.077918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.102052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGACC CGTTTGACCA GAAGAAAGTT TCTATATTGA AGGAGATCTC GTCCACCAAC 
GAAGACTCTC CCGATGCTTC TCCAAAGGGT ACTATCGATG AGCTCTGTAT TCCCATAATA
GAACTTATAA ACTCGCACAA TGATATGGTG ACTACTTCTT CGTGTTCAGG AAGAGTATCA
GTTTTCCTTG AAGGGATCAA GAATGTGGGA CATGACGATA CAAAGATCGG AGCCAAAGGT
AACCATGGTA GATGGATCTT TGTCACTCAC GACGTGAATC AGTTAAAAAA CTGGGATAGT
CAGGTTGATT TTCAATACGA ACAAAGTTGC GAGTTGGAGA AGTTAGACAT CACAACACGC
TATATTCTTT TCAAGTTTGA GCCTCTTATA CTTCATGTAA AGTGTAGAGA CTTGAAGCTG
GCTACTGCCT TATACACTGC GGCCATGAAT TGTGGGTTCA GGGAATCAGG AATCGGATCC
AATAACGTTG TAGCTATCAG AATATCCATC AAGCTTGACA CTCCCATTGG GTACTTGAAA
GGAGACAGGT TGGTTTCCGT TGTGAGTACT TCGTATTTGA GCATGTTGAC AAAACTTGCC
GAGGATCGTT TCAAAGAGAA TGCTAAGAAG ATAGACGAGT TGTACAAGGC TATATCTGGA
TTCAACCAAG TTGAGAAGAT CGATGAGGTT ACAGAGACAA AAGAACAGAG ACGAGAACGC
AAAATCCGGG AAGGAATGGA AATACGAGAA GCAGTTAGAT TACAGAAGGA GAAGAAACGA
AAAGAGAAGG AGCAAAAGCA GCAAGAGCAA CAGCGGCAAG AGGAGTTGAA CAATAAGATA
GAGAAGTTGG CTATCTAG
 
Protein sequence
MLDPFDQKKV SILKEISSTN EDSPDASPKG TIDELCIPII ELINSHNDMV TTSSCSGRVS 
VFLEGIKNVG HDDTKIGAKG NHGRWIFVTH DVNQLKNWDS QVDFQYEQSC ELEKLDITTR
YILFKFEPLI LHVKCRDLKS ATALYTAAMN CGFRESGIGS NNVVAIRISI KLDTPIGYLK
GDRLVSVVST SYLSMLTKLA EDRFKENAKK IDELYKAISG FNQVEKIDEV TETKEQRRER
KIREGMEIRE AVRLQKEKKR KEKEQKQQEQ QRQEELNNKI EKLAI