Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_56695 |
Symbol | |
ID | 4837847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 105513 |
End bp | 106370 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640389162 |
Product | predicted protein |
Protein accession | XP_001383653 |
Protein GI | 150864712 |
COG category | [S] Function unknown |
COG ID | [COG1590] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.077918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.102052 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAGACC CGTTTGACCA GAAGAAAGTT TCTATATTGA AGGAGATCTC GTCCACCAAC GAAGACTCTC CCGATGCTTC TCCAAAGGGT ACTATCGATG AGCTCTGTAT TCCCATAATA GAACTTATAA ACTCGCACAA TGATATGGTG ACTACTTCTT CGTGTTCAGG AAGAGTATCA GTTTTCCTTG AAGGGATCAA GAATGTGGGA CATGACGATA CAAAGATCGG AGCCAAAGGT AACCATGGTA GATGGATCTT TGTCACTCAC GACGTGAATC AGTTAAAAAA CTGGGATAGT CAGGTTGATT TTCAATACGA ACAAAGTTGC GAGTTGGAGA AGTTAGACAT CACAACACGC TATATTCTTT TCAAGTTTGA GCCTCTTATA CTTCATGTAA AGTGTAGAGA CTTGAAGCTG GCTACTGCCT TATACACTGC GGCCATGAAT TGTGGGTTCA GGGAATCAGG AATCGGATCC AATAACGTTG TAGCTATCAG AATATCCATC AAGCTTGACA CTCCCATTGG GTACTTGAAA GGAGACAGGT TGGTTTCCGT TGTGAGTACT TCGTATTTGA GCATGTTGAC AAAACTTGCC GAGGATCGTT TCAAAGAGAA TGCTAAGAAG ATAGACGAGT TGTACAAGGC TATATCTGGA TTCAACCAAG TTGAGAAGAT CGATGAGGTT ACAGAGACAA AAGAACAGAG ACGAGAACGC AAAATCCGGG AAGGAATGGA AATACGAGAA GCAGTTAGAT TACAGAAGGA GAAGAAACGA AAAGAGAAGG AGCAAAAGCA GCAAGAGCAA CAGCGGCAAG AGGAGTTGAA CAATAAGATA GAGAAGTTGG CTATCTAG
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Protein sequence | MLDPFDQKKV SILKEISSTN EDSPDASPKG TIDELCIPII ELINSHNDMV TTSSCSGRVS VFLEGIKNVG HDDTKIGAKG NHGRWIFVTH DVNQLKNWDS QVDFQYEQSC ELEKLDITTR YILFKFEPLI LHVKCRDLKS ATALYTAAMN CGFRESGIGS NNVVAIRISI KLDTPIGYLK GDRLVSVVST SYLSMLTKLA EDRFKENAKK IDELYKAISG FNQVEKIDEV TETKEQRRER KIREGMEIRE AVRLQKEKKR KEKEQKQQEQ QRQEELNNKI EKLAI
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