Gene PICST_56214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_56214 
Symbol 
ID4837657 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp1114229 
End bp1115212 
Gene Length984 bp 
Protein Length294 aa 
Translation table12 
GC content43% 
IMG OID640388972 
Productpredicted protein 
Protein accessionXP_001382434 
Protein GI150863828 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CACGATTCCA TATACGTGCT CTCTATCCCC ATCACCACGT ACAAGTCCTA TATCTACTGT 
AACCACAAGC CTAGCATACT AGACAAGAGC CAGAAACTGA AGTTCCCTTT GGTGACCAAG
ATCGAAACCA AAGTCACCGG AATAGCAGCC AAAGGCTGGA ACTCTTTGAG TACTTCAAAA
AAGTCGTACA ACGTCAAAAT CACAAACTTC ATCAAGAAGC TCCTCAATAC TATTCCCTAC
GAGGAAAACT GCTTGAAGTC ATTTCCGTCA CAGACAGCAA TGATTCGAGA AATCAATGAA
GAATCGTTGG ACGAGGTCAA CAAGAAATTA GACTCAGAGG GAACTGCCTC GGCTGTTGTT
CTGTCACAAA TAGACGATCT TAATATTCCA CACCACCAAA TCAAACCCAT CCCGTTATTA
CACCCTTCGT TCCAACAACC AACAACCATC TTGAACCAAT TGTATAACTT CAGAGACAAC
GCACACCTGA AGCACTTCAA GTATGCTGTC CTATGCGGTG TCGGCATTCC TCTCTCTTTG
CCATTTGCCT TGGTACCAGT AGTTCCCAAC GTGCCTGGCT TCTATATTGC CTACCGATTC
TACTGCCACG TCAAGGCTCT ACTCGGAGTC AAGCACTTGA ATTACCTTTT GGAAGTAGAG
CCCAAAAGAG AACTTGCTGC AAGTCAAGAA GACCCAAAAG TTAAGCTAGA GACAATTACG
GATGAAAAGG CTATCTTGGA TACTAAGCAC TTGTCCTTCA GTGCTGTACA CGAACTCGAC
AAAATCTACA GAAGAGGAAA CATCCGTAAT AGCTTGGGCG AACCAGTGCA AGAAGAAGAA
AGAGTAATTA TCTCCGAGAA AATCATTGAT GATCTCTGCT CAGAATTCAG CATGGACTAC
TTAAAAGACG ACTTGTTGAA GGCATTGAAA CAGGAATCAG CCAGACTAAG CAAGAACTTG
AAAGTAGACG ATGCTGTCGA GTAA
 
Protein sequence
HDSIYVLSIP ITTYKSYIYC NHKPSILDKS QKSKFPLVTK IETKVTGIAA KGWNSLSTSK 
KSYNVKITNF IKKLLNTIPY EENCLKSFPS QTAMIREINE ESLDEGTASA VVSSQIDDLN
IPHHQIKPIP LLHPSFQQPT TILNQLYNFR DNAHSKHFKY AVLCGVGIPL SLPFALVPVV
PNVPGFYIAY RFYCHVKALL GVKHLNYLLE VEPKRELAAS QEDPKVKLET ITDEKAILDT
KHLSFKERVI ISEKIIDDLC SEFSMDYLKD DLLKALKQES ARLSKNLKVD DAVE