Gene PICST_56209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_56209 
SymbolHNT2 
ID4836641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp2055324 
End bp2055863 
Gene Length540 bp 
Protein Length179 aa 
Translation table12 
GC content48% 
IMG OID640387956 
Productdiadenosine polyphosphate hydrolase 
Protein accessionXP_001382623 
Protein GI150863963 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.270188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGA TATACTTCTA TAAGTACTTG GTGACGCCGC AGGTGTTCTT CAAGTCCAAA 
TACACCTACG CTCTTGTCAA TATCAAGCCT CTTCTGCCTG GCCATGTTCT CGTGGTTCCA
CTTCGTACTT CGGTGCTTCG CTTTGGAGAT TTAACCACGG AAGAGTCGCA AGATTACATG
GACACATTGC AGCTTGTGCA TAAGCTCATT CTCTGGGTAT ACAAGGCCGA TTCGCTTAAC
ATAGCTATTC AAGATGGGCC CGAATCTGGC CAGTCTGTGC CTCATTTGCA TACCCATTTG
ATACCTCGGC ACAGGAACGA CGGCTACATC AACGACAAAT TGCATAGGCT CCTTGAGGAC
TATGACATAG AAGCTAATTA CGCCGATTTT GAAGCTAGAA AGAAGTCGTT TCGAGACATT
GAAGTGCCGT TCGTGCTGGA GACTGAGCGA GTAGAGAGAA CCCCGGAGGT GATGCACCAA
GAAGCCAGCT GGTTGGCACA GGAGCTCACG AAATACCGAC AGCAATTGGA GAAAGAGTAG
 
Protein sequence
MSEIYFYKYL VTPQVFFKSK YTYALVNIKP LSPGHVLVVP LRTSVLRFGD LTTEESQDYM 
DTLQLVHKLI LWVYKADSLN IAIQDGPESG QSVPHLHTHL IPRHRNDGYI NDKLHRLLED
YDIEANYADF EARKKSFRDI EVPFVSETER VERTPEVMHQ EASWLAQELT KYRQQLEKE