Gene PICST_56184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_56184 
SymbolOST6 
ID4837076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp2100563 
End bp2101600 
Gene Length1038 bp 
Protein Length345 aa 
Translation table12 
GC content41% 
IMG OID640388391 
Productsubunit of N- oligosaccharyltransferase complex 
Protein accessionXP_001383169 
Protein GI150864383 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.905393 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGGGA GTTTCACATA CCTTACGGTA GTTTTTACCG CCTTTTTAAC ATTAGTATGC 
GGAAGTTCTC TTCAACTCCA ACAGCTTCTT CTTCAATCGT CAGACTATGA ACACAACATC
ATACCGATTG TCCAGTCCGA CTTGTCGTCT CTTTCGGGGC CCAGGGACTA CTTTACGTTG
ATGTTGCTTA CTTCCTCTGA TTCTAAACAT CAATGCGATG TATGCGTGGA AGTCCAGAAG
ATCATTTCTC GTGTAGCTGA CTCGTGGTTC GCTGAATATA GAACCAATTC CAATTTGGTA
TTTATCAATG TTGACATTAT CGACAGAGAA AACATTAAAA TCTTCGACGC TTTGCAAATA
ACAAACATTC CCCATATTTG GTTGTTCCCA CCAAACATCT ACAAGGAACA TTCCACTGAA
AAGGGGTTGG ACTTCTCGTT GCTCGAAGAT CCTCACTATA TCTATAAAGT CCCTGAGGCT
CCTTTTGAAG AACAGGTAAG GGAGTTCGCT AGATTTTTAA GCGAAAACTT GAACAAGAGC
GTGGCTATTA AACAGAAAAG TCCCTTAAAT ACGTTTGCCA CGACATTCAT AGCTACGTTG
GTGATAATCA CCCTCGTCAA GAGGAAGGGT CCTAAAGTAA TCACCCAGCT TCCAAAGAAA
CATGTAGTTA CAATGCTCTC TGTGGCTATG ATCTTGTTGT TTGTTTGTGG GTATCAATTT
AGCGTCCTGA AAGGAGTTCC ATTCGTGGCC CGTAACGAAA AAGGTCTTAT CTTCATCAGC
GGTGGAACAC ACTATCAGTT TGGTATAGAA GTAGTATTTG TCGCTGTCAA CTATTTGGCT
CTAGGCTTTG CCTTTTTGGT GTTGATGTAC ATTGGCTCGT ACAATGTCAA TTCTAAGAGC
ATAATACGCC TGGACGACGT AAAACATGTC TTGATCATAG TCATGAATGT CATAATCTAC
TATCTTTACA GCTGTTTAAC CAGTATAGTG ATTAGAAAAG ATCATGACTA TCCATACAGT
CTCACCAAGC TATTCTAA
 
Protein sequence
MYGSFTYLTV VFTAFLTLVC GSSLQLQQLL LQSSDYEHNI IPIVQSDLSS LSGPRDYFTL 
MLLTSSDSKH QCDVCVEVQK IISRVADSWF AEYRTNSNLV FINVDIIDRE NIKIFDALQI
TNIPHIWLFP PNIYKEHSTE KGLDFSLLED PHYIYKVPEA PFEEQVREFA RFLSENLNKS
VAIKQKSPLN TFATTFIATL VIITLVKRKG PKVITQLPKK HVVTMLSVAM ILLFVCGYQF
SVSKGVPFVA RNEKGLIFIS GGTHYQFGIE VVFVAVNYLA LGFAFLVLMY IGSYNVNSKS
IIRSDDVKHV LIIVMNVIIY YLYSCLTSIV IRKDHDYPYS LTKLF