Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_55999 |
Symbol | |
ID | 4837635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 2433369 |
End bp | 2433848 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640388950 |
Product | predicted protein |
Protein accession | XP_001382693 |
Protein GI | 150864018 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5030] Clathrin adaptor complex, small subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.226774 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCT ACACTCCAGT AGATATACCC ACACAGATAC TATTGGTTCA ACAAGTTTAC AAGTTGATCT CTTCTAGAAC AGCACTGGAA TGTTCTTTCA TTACGCCTCC TTCATTGTTA GAGGACTTGG ACGATATCAT GGTGATCTAC AGACACTATG CTACACTTTA TTTTGTATTC GTAGTCGACG ACCAAGAGTC GGAGTTAGGA ATCCTTGATT TAATCCAGGT ATTTGTCGAA TGCCTCGACA AGTGCTTCAC TAACGTGTGT GAGTTGGATT TGGTGTTTGG CTGGCAGGTA TTGCAGACAG TCTTGGAAGA AATTATTCAG GGAGGCATGG TTATTGATAC AAATATCAGC CGCATTGTAG CGGCAGTCGA TGAGGCCAAT AGTCAGAAGA GTAGTACAAC GTCTGCTAGC AGTATAAGTG CCTCTTTCTT GCTGGCTGTC TCCAGGGATA GAAGCTTCTG GGGAAGATGA
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Protein sequence | MKFYTPVDIP TQILLVQQVY KLISSRTASE CSFITPPSLL EDLDDIMVIY RHYATLYFVF VVDDQESELG ILDLIQVFVE CLDKCFTNVC ELDLVFGWQV LQTVLEEIIQ GGMVIDTNIS RIVAAVDEAN SQKSSTTSAS SISASFLSAV SRDRSFWGR
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