| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_55711 |
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| Symbol | URA1 |
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| ID | 4837012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 1837338 |
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| End bp | 1838675 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640388327 |
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| Product | dihydroorotate dehydrogenase |
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| Protein accession | XP_001382579 |
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| Protein GI | 150863928 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0167] Dihydroorotate dehydrogenase |
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| TIGRFAM ID | [TIGR01036] dihydroorotate dehydrogenase, subfamily 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.486902 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCGT TCTTTTCACC CAGAGTCTTA CAGACGTCTC GAATTTTGGC TAAAAGAGCT
GCCGGTCATT CTTCTCGCCC AACCGTCTTA AAGGCTGGAT TTTTGCCTAC TCCCGTGGTT
TTAGCCTTGG GTTTGACTGG TGCTGCTGTG GGAGGCTACT ACTTTTTCGA TGCTCGTTCT
GCCTTTCACG AGTACGTTTT GTGCCCCCTT ATTAGAACCT TTACTGACGG GGAACAGGGC
CACAAGTTGG GTATCTTGTT TATGAAGTTG GGTGTATCTC CTAGATTGTA CAACGAATAC
AACACTGATC AAACTGATAT CTTGGGTGTC AACGTGTTTG GCACAAGATT GAGAACTCCC
ATTGGCTTAG CTGCCGGCTT GGACAAGGAC GGTGAAGCCA TTGAAGCTTT GTTCAACTCC
GGATTTTCTT ACGTCGAAAT TGGATCTATC ACTCCATTGC CCCAACCAGG TAACCCCCAA
CCCAGATTCT TCAGGTTGCC CAGAGACGAT GCTGTGATCA ATAGATACGG CTTCAACTCT
ACGGGCCACT TCAATGTGCT CGCCAACTTG AAAATTAGAT TCAATAAGTT GTTGAACCTG
TTTGAAACTA GTCATTCGGC TGAAATCTCA CCTCCTTCCA ACGCCTTTAG GGATGGAAAG
TTGCTTGGAA TCAACTTGGG CAAGAACAAG ACTGGAGACG AAGTGGAAGA CTACGTTAAG
GGTGTCAACA GATTAGGTCC CTACGCTGAT GTTTTGGTGG TTAATGTTTC TTCTCCCAAC
ACTCCTGGTT TGAGAGACTT GCAAAACGAA AAGAAGTTGA CTCATCTTTT GACTAGTGTA
GTCAAAGAAA GAAATGTCTT AGGAACCAAT TTGTTGGGCA AGAAGCCTCC CGTGTTAGTT
AAGGTAGCTC CAGATTTGAC AGAGCCAGAA ATTGAATCAA TCGCCAACTC AGCTAAGGAC
GCAAAAGTCG ACGGGATTAT TATCTCCAAC ACCACCATAC AAAGACCAGC AGAACTGATG
TTGACAACTG ATAAGGAATT GATCAATCAG ACTGGAGGTT TGTCTGGAAA GCCTTTGAAG
CCTTTCTCGT TGAAGGCGTT GCGAATTTTG AGAAAGTACA CTAAGGACTC TGACTTGGTT
TTGATTGGCT GTGGCGGTAT TTCCAGTGGT AAGGATGCTC TCGAGTTCGG TAAAGCTGGT
GCTACCTTTA TCCAGTTCTA CACTTCTTTT GCCTACAAGG GTCCAGGCTT GCCAGCCAAG
ATCAGAGACG AACTCGCAGA TGAGTTGAAG AAGGAAGGGA AGACCTGGGA GCAGATTATC
GGGGAAGACG ACAAATAA
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| Protein sequence | MKSFFSPRVL QTSRILAKRA AGHSSRPTVL KAGFLPTPVV LALGLTGAAV GGYYFFDARS
AFHEYVLCPL IRTFTDGEQG HKLGILFMKL GVSPRLYNEY NTDQTDILGV NVFGTRLRTP
IGLAAGLDKD GEAIEALFNS GFSYVEIGSI TPLPQPGNPQ PRFFRLPRDD AVINRYGFNS
TGHFNVLANL KIRFNKLLNS FETSHSAEIS PPSNAFRDGK LLGINLGKNK TGDEVEDYVK
GVNRLGPYAD VLVVNVSSPN TPGLRDLQNE KKLTHLLTSV VKERNVLGTN LLGKKPPVLV
KVAPDLTEPE IESIANSAKD AKVDGIIISN TTIQRPAESM LTTDKELINQ TGGLSGKPLK
PFSLKALRIL RKYTKDSDLV LIGCGGISSG KDALEFGKAG ATFIQFYTSF AYKGPGLPAK
IRDELADELK KEGKTWEQII GEDDK
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