Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_55633 |
Symbol | |
ID | 4836738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 957552 |
End bp | 958856 |
Gene Length | 1305 bp |
Protein Length | 435 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640388053 |
Product | predicted protein |
Protein accession | XP_001382956 |
Protein GI | 150864221 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CAGTCGATTT TGCAACGGGT CCAGACCAGC ATGTCATTCT TCAACGAAAA GTTGTCACAG AAAAGACACC GTTTGACATA CAAGTTTGGT CTTATCTACT TCTTGATGGC ATTTTTTGTG TTGGGAATCT TTTCCATTTA CTGGGGGTCT ATGTACAACA GATTTGACCG TCTCAGAAAC TTGAGAATGT TGGTGGTCAT TGAAGACGAA GAAGTAAATG GTATTCTGCC ATACATTGGA GACGAAATCA GGGCAATTTT GAGGGACCCA ATTGCTAAAT ATCACGGTGA CTGGATTGTT TTCAACTCTT CTGAATTCCA GGCTGTGGCA GATAGACATA ACAATTCTAT TGAAGCAGAA ATTCAAAGAC AAATCCACCA CCAGCGGTAC TGGGCTTCCC TCTATGTCAA GCCTAATGCT ACCTACAACT TGTATCAGGC TTTGCTCACA GGTGACACCA CCTATAATGT CACCAACAAC TCGGTTATCA GCATCTACGA GACCGGAAGG GACTTCTTGA ACATGAACAG TTACGTCATT CCCAGTGTAG AAACCATAGA GGAAATGTGG TTGGATACGC AGGCTCCGGT AATGCTCCAG ATTGCAGAAC AGTTACCTAA TAGAACAGAA GTTTTGGCCC ACCCGGGCTC GCTTTCGATC CTTGCTTCCC CTATCAGTTT AGCATTCTTT GATCTCAGAC CCTACACTGA TCCTGTCTTA GTGGCCCCAT CACAAGTCGG GTTGATCTAC ATGATTATCG TCACTTTTTT CCAGTTCAAC TTCTTTGCCG ATATCCACCA GGAAGTAGCC AAGTTTGGCT TGAAGAAAAA CCACTACATC TTGTACCGTT TCATTGCATC CGTTATCTCA TTCTTTGTGC TTAGTTTGTT CTACTCGTTG GTAACGTTAG CTTTCCAGGT TGATTTCACT AAGGCATTTG GAAAGTCCGG ATTCCTTGTC TACTGGATGA TTTCATTCTT GACAATGTGG GCTGTGGGTT CTGCAAACGA AATCATGGGT ATGTTGCTTA TAGCCTTCTA CCCTCCAATG TTAGGTTTCT GGATGTTGTT CTGGGTCATT GTCAACATTA CGCCAACATT CACTCCTCTT GCATTGAGTG CTAAGTTTTT CAGATATGGT TATGGTTTAC CCATCCACGC CTCTTATGAG CTTACTAAGG TTGTTTTCTT CGACACCTAC AAGGGGGCCA TGGGAAGAAA CTTCGGCATT CTTATTGCTT GGATTGTGAT TTTAACAGCA ATTTTGCCAT TTGTAGTGGT ATTCTTCGGA AAAACTATGG CCAAA
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Protein sequence | QSILQRVQTS MSFFNEKLSQ KRHRLTYKFG LIYFLMAFFV LGIFSIYWGS MYNRFDRLRN LRMLVVIEDE EVNGISPYIG DEIRAILRDP IAKYHGDWIV FNSSEFQAVA DRHNNSIEAE IQRQIHHQRY WASLYVKPNA TYNLYQALLT GDTTYNVTNN SVISIYETGR DFLNMNSYVI PSVETIEEMW LDTQAPVMLQ IAEQLPNRTE VLAHPGSLSI LASPISLAFF DLRPYTDPVL VAPSQVGLIY MIIVTFFQFN FFADIHQEVA KFGLKKNHYI LYRFIASVIS FFVLSLFYSL VTLAFQVDFT KAFGKSGFLV YWMISFLTMW AVGSANEIMG MLLIAFYPPM LGFWMLFWVI VNITPTFTPL ALSAKFFRYG YGLPIHASYE LTKVVFFDTY KGAMGRNFGI LIAWIVILTA ILPFVVVFFG KTMAK
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