Gene PICST_55633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_55633 
Symbol 
ID4836738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp957552 
End bp958856 
Gene Length1305 bp 
Protein Length435 aa 
Translation table12 
GC content43% 
IMG OID640388053 
Productpredicted protein 
Protein accessionXP_001382956 
Protein GI150864221 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CAGTCGATTT TGCAACGGGT CCAGACCAGC ATGTCATTCT TCAACGAAAA GTTGTCACAG 
AAAAGACACC GTTTGACATA CAAGTTTGGT CTTATCTACT TCTTGATGGC ATTTTTTGTG
TTGGGAATCT TTTCCATTTA CTGGGGGTCT ATGTACAACA GATTTGACCG TCTCAGAAAC
TTGAGAATGT TGGTGGTCAT TGAAGACGAA GAAGTAAATG GTATTCTGCC ATACATTGGA
GACGAAATCA GGGCAATTTT GAGGGACCCA ATTGCTAAAT ATCACGGTGA CTGGATTGTT
TTCAACTCTT CTGAATTCCA GGCTGTGGCA GATAGACATA ACAATTCTAT TGAAGCAGAA
ATTCAAAGAC AAATCCACCA CCAGCGGTAC TGGGCTTCCC TCTATGTCAA GCCTAATGCT
ACCTACAACT TGTATCAGGC TTTGCTCACA GGTGACACCA CCTATAATGT CACCAACAAC
TCGGTTATCA GCATCTACGA GACCGGAAGG GACTTCTTGA ACATGAACAG TTACGTCATT
CCCAGTGTAG AAACCATAGA GGAAATGTGG TTGGATACGC AGGCTCCGGT AATGCTCCAG
ATTGCAGAAC AGTTACCTAA TAGAACAGAA GTTTTGGCCC ACCCGGGCTC GCTTTCGATC
CTTGCTTCCC CTATCAGTTT AGCATTCTTT GATCTCAGAC CCTACACTGA TCCTGTCTTA
GTGGCCCCAT CACAAGTCGG GTTGATCTAC ATGATTATCG TCACTTTTTT CCAGTTCAAC
TTCTTTGCCG ATATCCACCA GGAAGTAGCC AAGTTTGGCT TGAAGAAAAA CCACTACATC
TTGTACCGTT TCATTGCATC CGTTATCTCA TTCTTTGTGC TTAGTTTGTT CTACTCGTTG
GTAACGTTAG CTTTCCAGGT TGATTTCACT AAGGCATTTG GAAAGTCCGG ATTCCTTGTC
TACTGGATGA TTTCATTCTT GACAATGTGG GCTGTGGGTT CTGCAAACGA AATCATGGGT
ATGTTGCTTA TAGCCTTCTA CCCTCCAATG TTAGGTTTCT GGATGTTGTT CTGGGTCATT
GTCAACATTA CGCCAACATT CACTCCTCTT GCATTGAGTG CTAAGTTTTT CAGATATGGT
TATGGTTTAC CCATCCACGC CTCTTATGAG CTTACTAAGG TTGTTTTCTT CGACACCTAC
AAGGGGGCCA TGGGAAGAAA CTTCGGCATT CTTATTGCTT GGATTGTGAT TTTAACAGCA
ATTTTGCCAT TTGTAGTGGT ATTCTTCGGA AAAACTATGG CCAAA
 
Protein sequence
QSILQRVQTS MSFFNEKLSQ KRHRLTYKFG LIYFLMAFFV LGIFSIYWGS MYNRFDRLRN 
LRMLVVIEDE EVNGISPYIG DEIRAILRDP IAKYHGDWIV FNSSEFQAVA DRHNNSIEAE
IQRQIHHQRY WASLYVKPNA TYNLYQALLT GDTTYNVTNN SVISIYETGR DFLNMNSYVI
PSVETIEEMW LDTQAPVMLQ IAEQLPNRTE VLAHPGSLSI LASPISLAFF DLRPYTDPVL
VAPSQVGLIY MIIVTFFQFN FFADIHQEVA KFGLKKNHYI LYRFIASVIS FFVLSLFYSL
VTLAFQVDFT KAFGKSGFLV YWMISFLTMW AVGSANEIMG MLLIAFYPPM LGFWMLFWVI
VNITPTFTPL ALSAKFFRYG YGLPIHASYE LTKVVFFDTY KGAMGRNFGI LIAWIVILTA
ILPFVVVFFG KTMAK