Gene PICST_55621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_55621 
SymbolOYE2.3 
ID4837399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp560784 
End bp561989 
Gene Length1206 bp 
Protein Length401 aa 
Translation table12 
GC content47% 
IMG OID640388714 
ProductNAPDH dehydrogenase (old yellow enzyme) 
Protein accessionXP_001382344 
Protein GI126131638 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.739126 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTA CCTCGTTGAA GTCCACCAAC CTTTTCAGAC CAATTAAGGT CGGTTCTGCC 
ACCTTGCAAA ACAGAATTTC TCACTTGCCA ACCACCAGAA ACAGAGCCTA CGAAGATCAC
TCTGCCACAG ACTTGCAACT TCGCTACTAC GAAGACAGAT CCTCGTCGCC TGGTACTCTT
TTGGTCACTG AAGCCACACT TATCTCGAAG AACCAAGGTC TCTACCCTAA CGTTCCAGGT
ATCTGGAACA AGGACCACGT CAACTCTTGG AAGAAGGTCA ATGACGCCGT CCACAAGAAG
GGAGGCTTCA TCGCTGTCCA ATTGTGGGCT TTGGGTCGTG TTGGTGTTCC AAGCTTGTTG
AAGGCTGAAG GTTTACCATT GACTTCTTCC TCGGCTTTGT ACGAGTCGGA AAAGTCCAAG
GAAGCTGCCG AAGCTGCTGG TAACCCAGTT AGGGCCTTGA CTGAAGAAGA GATCAAGGAC
CTTATCTACA ACCAATACAC GAACGCTGCA AAGAATGCCA TTGAAGCCGG ATTTGACTTT
CTTGAAATCC ACGGTGCCAA TGGTTACTTA GTGGAACAGT TCATCAACCC AAGCTCTAAC
ACCAGAACTG ACAAGTACGG TGGCTCTATT GAGAACAGAG CCAGATTTGT GTTGGAATTG
ATTGACCACT TGATCTCAGT AGTAGGTGCT GACAAGTTGG CAATCAGACT TTCTCCTTTC
AACACTTTCC AAGGTATGTT GGCTGAGGAT GAAGCCGTTC ACCCCATTGC TACCTTCGGT
TATATTGTTT CTGAATTGCA GAGAAGGGCT AACGAAGGTA AAGAATTGGC CTACATCAAC
GTAGTTGACG GTCGTTTCAA CCCAGATGGC ACTGAATCTG CGCTTGACAA CAAGTTCATC
GATCAGATCT GGAAGGGTAT CATCTTGAGA GGTGGTAACT ACACTTACGA CGACAAGAAC
AACTGGGCTA ATGTCGCTAA GGACGTAGAC CAGGACGACC GTACCTTAAT TGGTTTCGGT
AGACACTTCA TTGCCAACCC TGACTTGGTT TCCAGATTGG AAAACGGTCA TGAATTGAAT
GCTTACGACA GATCTACCTT CTACGGCCAC GATAACAACG GCTACAACAC GTACCCATTC
TATGGATCCT CTGAAGTGGT GGACGCTGAA GCTGAATCGA AGGTGGTTCC AAAGTCGTTG
GCTTAA
 
Protein sequence
MTATSLKSTN LFRPIKVGSA TLQNRISHLP TTRNRAYEDH SATDLQLRYY EDRSSSPGTL 
LVTEATLISK NQGLYPNVPG IWNKDHVNSW KKVNDAVHKK GGFIAVQLWA LGRVGVPSLL
KAEGLPLTSS SALYESEKSK EAAEAAGNPV RALTEEEIKD LIYNQYTNAA KNAIEAGFDF
LEIHGANGYL VEQFINPSSN TRTDKYGGSI ENRARFVLEL IDHLISVVGA DKLAIRLSPF
NTFQGMLAED EAVHPIATFG YIVSELQRRA NEGKELAYIN VVDGRFNPDG TESALDNKFI
DQIWKGIILR GGNYTYDDKN NWANVAKDVD QDDRTLIGFG RHFIANPDLV SRLENGHELN
AYDRSTFYGH DNNGYNTYPF YGSSEVVDAE AESKVVPKSL A