Gene PICST_55335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_55335 
SymbolPHO13 
ID4837405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp1723596 
End bp1724522 
Gene Length927 bp 
Protein Length308 aa 
Translation table12 
GC content41% 
IMG OID640388720 
Productp-nitrophenyl phosphatase 
Protein accessionXP_001382554 
Protein GI126132058 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0647] Predicted sugar phosphatases of the HAD superfamily 
TIGRFAM ID[TIGR01452] phosphoglycolate/pyridoxal phosphate phosphatase family
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.424742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.747519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGTAA AGATAACCAA CAAGGAACAA GTTCAAAGCT TATTGGGCCA GTACGACTAT 
TTCTTGTTCG ATTGTGATGG TGTTCTCTGG TTGGGAGATC ACTTGTTACC ACATGTGCCC
GAGACCTTGA ACTTATTGAA GGAGCACAGA AAGACAGTTA TCTTTGTTAC AAACAACTCT
ACCAAATCAA GAGATGACTA CTTAAAGAAA TTTCAAAAGC TTGGTATCTC AGGGATCACC
AAAGACGAAG TATTTGGCTC CTCCTATGCT TCTGCAGTAT ACATTGATAA GATTCTTAAA
TTGCCAAAGG AGAAAAAAGT CTGGGTATTA GGAGAAGAAG GTATTGAAAA GGAACTTAAG
GAGTTGGGAT ATACAACTGT AGGTGGAAGT GACCCCGTCT TAGTGCAAGA TGGTGTGGCT
TTTGATCCTG AACATCCACA CTTGGTAGAG TTGGATGAAG ATGTAGGAGC AGTTCTTGCT
GGATTAACTT TGAATTTGAA CTACTTGAAG TTATCAATTA CCATGCAATA CCTTTTGAAA
GATAACAAGT CATTGCCGTT TATTGCTACC AATATCGACT CTACATTCCC ATCCAAGGGT
AAATTGTTGA TTGGGGCTGG TTCCATTATA GAAACCGTTG CATTTGCCAG TGGTCGTCAG
CCAGACGCTG TTTGTGGTAA GCCAAATCAA TCCATGATGA ACTCAATTAA GGCAGACAAT
CCAGGCTTGA GGGAAACGCC AAAGCGAGGT CTTATGATTG GTGACAGACT AAATACTGAC
ATGAAGTTCG GCAGAGACGG AGGGTTAGAT ACGTTATTGG TTTTGACAGG GATTGAAACT
GAAGAAAATG TCTTGAAGCA ACCAAAAGAT GTCGCCCCAA CCTATTATGC CAGTAAACTT
GGAGACCTTT ATGATTTTTG CAACTAG
 
Protein sequence
MSVKITNKEQ VQSLLGQYDY FLFDCDGVLW LGDHLLPHVP ETLNLLKEHR KTVIFVTNNS 
TKSRDDYLKK FQKLGISGIT KDEVFGSSYA SAVYIDKILK LPKEKKVWVL GEEGIEKELK
ELGYTTVGGS DPVLVQDGVA FDPEHPHLVE LDEDVGAVLA GLTLNLNYLK LSITMQYLLK
DNKSLPFIAT NIDSTFPSKG KLLIGAGSII ETVAFASGRQ PDAVCGKPNQ SMMNSIKADN
PGLRETPKRG LMIGDRLNTD MKFGRDGGLD TLLVLTGIET EENVLKQPKD VAPTYYASKL
GDLYDFCN