| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_55133 |
|---|
| Symbol | |
|---|
| ID | 4837279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | - |
|---|
| Start bp | 710092 |
|---|
| End bp | 710844 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640388594 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001382901 |
|---|
| Protein GI | 126132752 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1756] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0189665 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAGA AGAGCAAGAG TTCCGAGGGA AAGACGGCAG TTTCTGCCCC TCCAGCCTCA
CTTGTGCCCG TACAACCTGC TCCACTCAGT TCAAAGGACA AGACCACCAA GAGGTTGATC
GTAGTATTGT CCCAAGCCTG TTTGGAAACC CACAAGATGA ATTCTGGTGG CCCGGGAGGA
GACAAGTTTG CACTTTTGAA CTGTGACGAT CATCAAGGTT TGTTAAGAAA AATGGGCAGG
GATATCGCAG AAGCCCGTCC GGATATAACC CATCAGTGTT TGTTAACATT GTTGGATTCG
CCCATCAACA AGGCTGGCAA ATTGCAAGTC TACATCCATA CAGCCAGAGG AGTCTTGATA
GAAGTCAACC CCAGTGTTAG AATACCTAGA ACGTTCAAGA GATTTTCAGG CTTGATGGTC
CAGTTGTTGC ACAAGCTCTC TATTCGTTCA GTGAACTCCG AAGAAAAGCT CTTGAAGGTC
ATTAAGAACC CCATCACCGA CCACTTGCCT ACTAAATGTA GAAAGATCAC GTTGTCGTTC
GATGCCAAAG TGCGTCGTGT CCAGGACTAC GTTGAAACCT TGGATGAAGA CGAGAGTATA
TGTGTATTTG TAGGAGCTAT GGCTAGGGGT AAGGATAACT TTGCTGACGA GTACGTTGAC
GAAAAAATCG GGCTTTCTGA CTACCCATTG TCGGCATCGG TAGCCTGTTC CAAGTTCTGC
CATGGTTGTG AAGATGTATG GGGCATTTTC TAG
|
|---|
| Protein sequence | MSEKSKSSEG KTAVSAPPAS LVPVQPAPLS SKDKTTKRLI VVLSQACLET HKMNSGGPGG
DKFALLNCDD HQGLLRKMGR DIAEARPDIT HQCLLTLLDS PINKAGKLQV YIHTARGVLI
EVNPSVRIPR TFKRFSGLMV QLLHKLSIRS VNSEEKLLKV IKNPITDHLP TKCRKITLSF
DAKVRRVQDY VETLDEDESI CVFVGAMARG KDNFADEYVD EKIGLSDYPL SASVACSKFC
HGCEDVWGIF
|
|---|
| |