| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_54531 |
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| Symbol | |
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| ID | 4837003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 1923039 |
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| End bp | 1924712 |
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| Gene Length | 1674 bp |
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| Protein Length | 558 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640388318 |
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| Product | predicted protein |
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| Protein accession | XP_001383141 |
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| Protein GI | 150864363 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5560] Ubiquitin C-terminal hydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.737555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCGA ATTACAAATT TGCTAACCGA TCTCGGTTCA CAACCAGGAA GTCCAAGTCC
CACCGTTTCG CAATCAAAAA TGGTGGCGAG ATTGGCGGCC TCAGTAACGA CGGTAACACT
TGTTTTATGA ACTCGGTGCT TCAGTCGTTG GCATCATCCC GTGAGTTGCT TAAGTTTATC
GACTCCTACC TTTTCTCGGA AACAGCACTT CAGACTCCAC AAGGAAACGT GATCTCCATG
AAATCCAACT CTCCTAGACC AGAATTAATC TTCACCAATG CATTAAAAAC GTTGTTGGAT
AATCTCAATG GTAAATATGG AGCTCGTGGC AAGGAGTTCA GTACGAAAGC TCTCTTGAAC
AAGATGCCCA ATGGCCCCAA ACAGAACTTT TTCTCAGGCT ACAATCAGGA AGACGCCCAA
GAGTTCTACC AGCTCGTAAT GAGTTTGTTG GAACGGGAAT ACAAGAAAGT TTCCCAATCC
AGATTACCCA CCCCAGAACC AGAAGAAAAG GCCGGAAATC AGGAGAAGCA AGTGAGATTC
CTCGATATCG AAAATGTGCC GAACGTCGTC TTCGGCTGCG AAAAATTAGG AAAATTGGGT
AAAGTGTACG TTCCAGCCAA CCAGGTTGAC CCCAACTTGG TAGACTGTGA TCACAAGGTG
TTCCCACTTG AGTTGATTAC TCCTGTAGAT GGAATCTCAG CCGAAAGAAT CGGTTGTTTG
TCCTGCGGAG AAGTAGGTGG CATCCGTTAT TCTGTCAATT CAGGCTTGAG TTTGAATTTG
CCAAACAATT CTTCCTACTA CTCCAGCTTT GACTTGCTTC TGTTAATGAA CGACTGGATC
ACACCAGAAA TCATTGAAGA TGTCAACTGT AACAGATGTG GTTTGAATCA AACCAAAGAA
TTCCTTTTAG AGACTTTGCA GGACCTTCAA GCAAAGCCAA ACGGAGACAA GTTGAGGGAA
CAATTTCAAA TTCGTCTCGA TGCTATCGAT TCGGAATTGT TGAAACCTCA TATCACAGAC
GAAGTGTTCG AAAAGCTCAC CATAAAAAAG CATATTAGAA AAAGTAGAAA ATCCAAACAG
ATACTCTTGA GTAGACCGCC TCCGTTGTTG TCCATCCATA TAAATAGATC GGTATTTGAC
CCTAGAACAT ACATGATAGT CAAGAACTCC AGCAGTGTGA CTTTCCCGTC AAAGTTAAAC
TTGGCTCCAT ACATTGCCGA ACCAAGGGAT ATTAACATGG ACGCTAGATT GCCTTTCAGA
AAACAGGAAG AGAGAACAGT TTTGCAGCAG GAACAGACTA AAAATTCAGA AACACTTCCT
TCAACTCCGT CAGACTCGTC GTTGTCTTCC ACTCCTGAAG AAACGAAGTC AGACTCTACT
ACTAGCACCG ATATAGACAA CTTGGAACCA CTTCCAGTAG ATCCCAAGTT GTTGTACAAC
TTGAAGGCAG TAATCTCCCA CTATGGTACT CACAACTACG GCCACTACAT TTGCTACCGT
CAGTTGAGGG GTACATGGTG GAGAATTAGT GACGAATCTG TATATGTTGT CACTGAAGAA
GAAGTATTGA ACGCTCAGGG TACATTTATG ATCTTCTACG AGTTCGATGA TGGGCATAAG
GAATTTTTGC AAGATGTTTC TGATAGTGAA GAAGAGGAGG AGGAAGAGGA AGAT
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| Protein sequence | MSSNYKFANR SRFTTRKSKS HRFAIKNGGE IGGLSNDGNT CFMNSVLQSL ASSRELLKFI
DSYLFSETAL QTPQGNVISM KSNSPRPELI FTNALKTLLD NLNGKYGARG KEFSTKALLN
KMPNGPKQNF FSGYNQEDAQ EFYQLVMSLL EREYKKVSQS RLPTPEPEEK AGNQEKQVRF
LDIENVPNVV FGCEKLGKLG KVYVPANQVD PNLVDCDHKV FPLELITPVD GISAERIGCL
SCGEVGGIRY SVNSGLSLNL PNNSSYYSSF DLLSLMNDWI TPEIIEDVNC NRCGLNQTKE
FLLETLQDLQ AKPNGDKLRE QFQIRLDAID SELLKPHITD EVFEKLTIKK HIRKSRKSKQ
ILLSRPPPLL SIHINRSVFD PRTYMIVKNS SSVTFPSKLN LAPYIAEPRD INMDARLPFR
KQEERTVLQQ EQTKNSETLP STPSDSSLSS TPEETKSDST TSTDIDNLEP LPVDPKLLYN
LKAVISHYGT HNYGHYICYR QLRGTWWRIS DESVYVVTEE EVLNAQGTFM IFYEFDDGHK
EFLQDVSDSE EEEEEEED
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