Gene PICST_54259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_54259 
Symbol 
ID4837491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp1268302 
End bp1268817 
Gene Length516 bp 
Protein Length171 aa 
Translation table12 
GC content49% 
IMG OID640388806 
Productpredicted protein 
Protein accessionXP_001382462 
Protein GI126131874 
COG category[B] Chromatin structure and dynamics 
COG ID[COG2036] Histones H3 and H4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAGAA TCTCTACAAG CTCCAATAGA CCGTTACCCT CGTCCAACGC ATTGAGACGA 
CAGCGAGAAC GAGAAAGACA AGAACAGCAA AGAGGAAGAC AACCACAACG TTCTGCTGCT
CCTGGGTCGC GGCCGCAATC TGGAGCCAGT AGACAGCAAC AGACGGGAAT CTACAGAAAT
CAGCCGGGGG ATCCTACAGT GCAAGCTACT GTGAAAAGAA GATATAGACC AGGAACCGTT
GCTCTTCGAG AAATCAGACA GTACCAGAAA AACACTGACC TCTTGATTCG TAAATTGCCA
TTTGCCAGAC TTGTCAAAGA AGTGGCCGAA GACTATATCG GAGCTGACTA CGGGATCAGA
TGGCAGTCCA ATGCCGTGCT AGCCTTGCAA GAAGCCTGCG AAGCCTACTT GGTGCATTTG
CTAGAAGACA CCAACTTGTG TGCCATACAT GCCAAACGGG TGACAATCAT GCAGAAGGAC
ATCCAGTTGG CGAGAAGAAT TCGTGGCTAC TTGTGA
 
Protein sequence
MARISTSSNR PLPSSNALRR QRERERQEQQ RGRQPQRSAA PGSRPQSGAS RQQQTGIYRN 
QPGDPTVQAT VKRRYRPGTV ALREIRQYQK NTDLLIRKLP FARLVKEVAE DYIGADYGIR
WQSNAVLALQ EACEAYLVHL LEDTNLCAIH AKRVTIMQKD IQLARRIRGY L