Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_5333 |
Symbol | |
ID | 4851849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 3002081 |
End bp | 3003187 |
Gene Length | 1107 bp |
Protein Length | 369 aa |
Translation table | |
GC content | 43% |
IMG OID | 640393557 |
Product | predicted protein |
Protein accession | XP_001387141 |
Protein GI | 126275780 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.684837 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GATCCAAAAG TATTTGCTCC AAAGGCAGTA GCAAACCCAC CAGCAGAACT TGGCTTTAGA TTGAAGCTAA TAGTACAACT TGTAAAGGCT TATAGACAGC ACCATCCTGA TATCCAAACT CCTATAACAC GGGCCATAGA GGAAGAATAC AAAGTAGCTA AAGTTTCATC TAGAACGACT TACTCAGCAT CGATCAAGAA AGTGATCTAT GCGGCTCTTC ATCCAGAGAA AGCTAAGACG CCCAAGGAGA ACGGGCCCAC AGAAGAGCAA TACAAAAGGC TATTGTCCGA ACTCGTCATC CCCGTGGAGA AACTTGAGAA GTTCGGCTTT ATAATGAGAT CTCCAGAGAC TATTACTCCA AGTAGAATTC GCACATGCCA TAGATGTGGT GCGGAGTTCA CCCGTGACGA ACAGCTTCTG CCGGTTCAAT GTCAGTACCA TGCGGGCAGG GTGAGAAAGA CAGATTTTGG CAGAGTTTAC GAATGCTGTC AGTCCGAAGT CAGTCTGGGT GATACCCATC CGTGTACAGT ATCCAATATG CATGTGTTTT ACTGGCAGAA TAAGGAAGAA ATGGAGTGGT CTATTCCTTT CCAGAATACA GATAGACTCT TTGGTGAGAG TAAAGGGTCC TTATTTGCAA TTGGTATAGA TTGTGAGATG GGGTACACCA CCAGAGGACT GGAGCTCTTG AGAGTGACAG CAGTAGACTT CTTCTCTGGC AAAGACGTTT TGGATATCTT TGTAAGACCG TACGGAGAAG TAGTAGACTT AAATACGCGT TATTCTGGTG TATCTGAAAT AAAGCCCGAG GCAGTATCTT TCCATGAGAT GCTCAATCAA TTGGGCCATA TCATGGACAA GAACACGATT CTAGTCGGCC ATGGACTTGA GAACGATATG AATGCCATGA GACTTATCCA TAATAGAATT ATCGATACGT CTATCTTGTA TCCTAAACAC AAGGCCACTC CTACCTTCAA ATTCAGTTTA AAAGACCTCG CATTCCAGTA TCTCAGCCGT GTAATCCAAA CAGGAGAACA CGACAGTAGT GAAGATTCGC TAGCAGCCAT TGACATTGTA AAATATTTTA TCAAAAAGGA TATTCAG
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Protein sequence | DPKVFAPKAV ANPPAELGFR LKLIVQLVKA YRQHHPDIQT PITRAIEEEY KVAKVSSRTT YSASIKKVIY AALHPEKAKT PKENGPTEEQ YKRLLSELVI PVEKLEKFGF IMRSPETITP SRIRTCHRCG AEFTRDEQLL PVQCQYHAGR VRKTDFGRVY ECCQSEVSLG DTHPCTVSNM HVFYWQNKEE MEWSIPFQNT DRLFGESKGS LFAIGIDCEM GYTTRGLELL RVTAVDFFSG KDVLDIFVRP YGEVVDLNTR YSGVSEIKPE AVSFHEMLNQ LGHIMDKNTI LVGHGLENDM NAMRLIHNRI IDTSILYPKH KATPTFKFSL KDLAFQYLSR VIQTGEHDSS EDSLAAIDIV KYFIKKDIQ
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