| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_53206 |
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| Symbol | |
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| ID | 4852003 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 3396942 |
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| End bp | 3400919 |
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| Gene Length | 3978 bp |
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| Protein Length | 1105 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640393711 |
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| Product | predicted protein |
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| Protein accession | XP_001387222 |
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| Protein GI | 126276278 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCCA ATGCCAATTC GCAGCATCTG ACCTTGGCAA AGTTTGCTTT CAACATCTAC
GGATCGTTGA ATCACGCCAC TCCCAGCTAC GAAGGACTGG CATCCCCCTC TCTGTCGTAC
AGTTCTTCAC GATCGAAGAC CAATGAGCCT TACAACTACA GATTCAACAA ATTGGTGTAC
AATTGTGAGC GTGAAGTTAC CACACTATCG CAACTTAACT ATCCACTTTC GTTGTCGAAT
ACTTTCCAAT CGGACCAGAA CTTGTCACAT CATGTAATCA TCGGTGGTAG AAACTACTTG
AAGTTGCTAG CCTTGAACGA AGACCAGTCG CGAATTGTCC AAGACATCAA TGTTCTTGAT
CAGAGCTCGA TATACACCCA CAATTCACGT GTGCCGTCCA CAAACAAGTT GAACAACATC
AACACCGTCA AGGCGCAGTC AGACACCATA GGCTGTGGGT TATCCAATGG ACTTATCACT
GTGTATAAGG TAGGCTCCAA CGGTAAGTGC AGACTCATCC ACAAGTTTTC GGACCACAAA
CGTTGCATAA ATTCTCTAGA TTATGTGGGT ATTAGGAATT TGTATGATGC ACCGACCCAG
ATGATATCTG GATCGCAGGA TGGTTCTATA AAGCTTTGGG ACATGCGACT GTCTTCTCCC
AGACCTATGC TTACGATATC TTCAGGCAGC CATCTGGATC CCATTCGTTC ATGCCAATAC
TCTCCCCATT CACAGGGCCG TAACAAACTT GTAGTTCTCT CTGTCCACGA CTCGGGAGCG
TTGTGTAAAT TCGATTTACG ACTGTTTGGC TCCAACACCG CTGCCAACAC CAGTAGTAAT
GGCCATGGCC CAGAGAGAAA ATGGAATATC CATACTGGTC CAGCATTGTC ATTACACATC
CATCCCGAAA AGGAGTACGT TGTTACAGGA GGTAGAGACC AGAAGATTTG TGTGTTCAAC
TACGGCGATT CTCAGATATC CAATAGAATT ACACCAGACG AGATGATTAA CACTTATGGT
CCTGTAATGA AGGTACGATG GTGTCTATAT CCCGATGCAT CAACATCACA GTTTGGTGAA
CCTCTCGATA CGTTCCAGCA ATCTAACGAC TTCAACAGGT TTGAAGATAA GCTTTCGTAC
GATGAACGTG AGGCCATGTA CAGCTATCCT TCCTCCCTGC GTAGCAGTTC TCTATATAGC
TACGACTTGG CTTGTCTGTA CTTGAACGAT GACTCTACTG TAGCCATTTA CAATCTCAAC
AGGAAGTTCA TTCCTAAGGA GGTGATCACC ACGTCATCTA ATAAGCCTAT TCAGAACTTC
ATCTGGGCTA ACAACCCAGG ATCGTCGCGT AAGATCTGGA CCATAACAAA GTCTAACGTG
TTTTCCAGTT ATGATCTAGA TATGCACGAC AGCCTTCTCG AGTCTGAAAT TTCCAAACCT
TTGGACGAAC TCGCTAATGT CACTGTAGAC TGGAACAATG GATTTGGCGA TCTCTGCTTA
GCCAACCAGG AAAAATATGA GTTTGAAATC ACAGAAGTAG AATCACAGGC AAGCGACAAC
GACATGGGTG ACATAGATAC AGAGTATTCG TCCAGATATG AAAGAAGCAA CTCTAACAGT
GTCATTGATG AAAGTGATAC CAGAAGCATT GATCACCATT CACCTGAAAA CGATGCTGCA
ACTATAGCAG CTGGTGGCTC AGGAAAGGCG TTTGTTGGCT CTGTACCCAT TGCATCAAAA
ATCCACGGCT CTTTATCAGG CTCATTGATA GGGTCGTCTT CGGCAGAAAA GCCTCCTCTT
TTCAGATCAA GCACTCATTA CTCGATGCAC ATGGCCAAAT CGCCATCTCC AGTACCTCGT
AGAGGTTCCA CATCATTTGC TGCTCATTCA GAATCCCAGC CAAATCTTTC TAATATGCAA
GGTTTATCGA TGTCAAGGCC AAAACTTACA CGTAATCTTT CGCAGGCTAC CGAAGACTCG
AGTATATCTA TCGGTTCGGC CCCACAGTCA AATATCCACT TAAAGCTGAA ACGTTCATTT
CAAGTTAGCT ATGCTTCACC ATATTTGGTG CCCGTGTCGT TACCGTTGTC TCTCAACGAC
GAAAACGTGT TCGAGATTCT CTCAAATAAC TACTTGATAT CCATTCCAGA TGGGTTTACT
TTAGTAGACG TATGTTTATT GAATGCCAGT GTTGCAGCCA GTGTACAACG GTTTCGTGAA
TGTCAAATCT GGCGAGTATT GGCTGTAAGC TTAGAGGAGG ATTATGTTCA AATTGACAAC
ACTACATTCT TGAGTGATCC AGAATTGGAG CATAATGAAA CTAACCAAGA TGAAAAGATC
GACGATCAGA AAGATGCTAA ATCCATACTG TCAGATTTGG GCAACTTTGT AGGGTCATAT
AATTCGAATT CAACCCTGAC CACTAACTAC GGAGGGTTGG GTAGTCTCAG TGCTAAAGAT
ACCAGTCAGG AATCTATTGG CAGAGAGATA CGTTCAATAG TATCGTCTTC TGTAGAATCG
GATGTCAAGA TCCCTCCTCC CAACCCTCCA TTAGCAAAGG CAAACAATTC CAACAATCTC
ATGGATATGA TCAACCGAAG CAGAGTGAAC AGTATGAACC ATCTTCAAAG CATAAGCCCA
TCTGGGTCCC ATACATTTAT CCGCAATGCT ATCCATGAAA ACAAAAGCAA CGAAAACGCA
ATTGTAGACG ATGACGAAAC TGACGCAGCA GTACATGGAA CTGAAGGTTC ATCACATATT
GCTCATCATA GAGAAAGACG TTCATCTTCG AAGAAAACTA AACCTACTCT TAGACATCAT
AGAAGTTCTC AAATACTGTA TGAAGTCGAT AAAGAAACTC AAAGTTCTCC AATAGCCATA
GCATCACCCT CAAAAATTGG CATTGGCTCC GGCGATAACT CGCCCAATTC TGCATTTTTA
CATCGCCATG CTGATTCGTT CTCATCTTCG TTTGCAGGTT CAAAGTTGGC AGGACGAATC
GGAACTTCTC ACGTTTCTGA AGATTTGGAC AACGAGAATC TTAACATTCT CAACAATGCT
GTTCTCAACT CGAGTCCAAA CTCAGCTATG ACGACTCCTC ATCCGCAATC AAATAGTCCC
AACTATTCAA ACTTTTTTTC ACTGTCGCAC CAGTCAGCTC AACACCATTC CATGGGTACT
GGTTCTGGTT CAACTTCAGT ACCTTCTCGT CGTAATTCTG CTATTCCAGC ATATGGATTC
CATAGACCTA AGTTGTCGTC TACATTCATG TCTCCTATTT ATGATGAATT TGCTGAAAAA
CAGGAACAAC CGCGTAGCTT GAAGGCCGAG TCCTTGTTGA ACAACGATGT CTCTGATAGA
ACTACAACGA AGTCTGAGCT TACTAAGGCA ATTAAAGAAG AAGTAGATAA TTCCAGTGGG
GCCCCGCTAA AGAAAGCTTG GAAGTCGCTG AGCTTATTGG AAAAAGCATT AGCGCATGCT
TCGAACGAGG GGGATATTAT TCTTTGCTCT ACACTTTCAC TCTTGTTTTA CGACTCGTTC
AAGCAGGTAA TCCCCCAATC GTCCTGTTTG GATTGGTTAG GGCTCTACAT TGAAATCCTA
CAAAGAAAAA GGTTGTTTGT CAATGCTATT CACGTTGTCA ATAATGCTCC TGATGACGTT
AGAAGCAAGT TGAAAAACTT GACCTCTGGC GATGTGGATC TCCGTTTCTT CTGTTGCTGG
TGCCAGAAAC TCTTGGTTAA TGAAAAGTCC AAGGAGAAAT TGAAAAATGA TGTCAATGCA
GACTTCGGCT ATTGGTACTG TGACGAGTGT AGTCAGAAGC AACTGAATTG TATCTATTGC
AACGAGCCTT GTAAGGGATT GACGGTAGTT GTTAGTCTTA AGTGTGGCCA CAGAGGACAT
TTTGGATGTT TGAGAGAATG GTTCATTGAG GACGAGAATA ATGAATGTCC GGGTGGCTGT
GATTACAGTG TAGTATAG
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| Protein sequence | MSSNANSQHL TLAKFAFNIY GSLNHATPSY EGLASPSLSY SSSRSKTNEP YNYRFNKLVY
NCEREVTTLS QLNYPLSLSN TFQSDQNLSH HVIIGGRNYL KLLALNEDQS RIVQDINVLD
QSSIYTHNSR VPSTNKLNNI NTVKAQSDTI GCGLSNGLIT VYKVGSNGKC RLIHKFSDHK
RCINSLDYVG IRNLYDAPTQ MISGSQDGSI KLWDMRLSSP RPMLTISSGS HLDPIRSCQY
SPHSQGRNKL VVLSVHDSGA LCKFDLRLSN GHGPERKWNI HTGPALSLHI HPEKEYVVTG
GRDQKICVFN YGDSQISNRI TPDEMINTYG PVMKVRWCLY PDASTSQFGE PLDTFQQSND
FNSSSLYSYD LACLYLNDDS TVAIYNLNRK FIPKEVITTS SNKPIQNFIW ANNPGSSRKI
WTITKSNVFS SYDLDMHDSL LESEISKPLD ELANVTVDWN NGFGDLCLAN QEKYEFEITE
VESQASDNDM GDIDTEYSSR YERSNSNSVI DESSLIGSSS AEKPPLFRSS THYSMHMAKS
PSPVPRRGST SFAAHSESQP NLSNMQGLSM SRPKLTRNLS QATEDSSISI GSAPQSNIHL
KLKRSFQVSY ASPYLVPVSL PLSLNDENVF EILSNNYLIS IPDGFTLVDV CLLNASVAAS
VQRFRECQIW RVLAVSLEED YVQIDNTTFL SDPELEHNET NQDEKIDDQK DAKSILSDLG
NFVGSYNSNS TLTTNYGGLG SLSAKDTTKA NNSNNLMDMI NRSRVNSMNH LQSISPSGSH
TFIRNAIHEN KSNENAIVDD DETDAAVHGT EGRIGTSHVS EDLDNENLNI LNNAVLNSSP
NSAMTTPHPQ SNSPNYSNFF SLPKLSSTFM SPIYDEFAEK QEQPRSLKAE SLLNNDVSDR
TTTKSELTKA IKEEVDNSSG APLKKAWKSL SLLEKALAHA SNEGDIILCS TLSLLFYDSF
KQVIPQSSCL DWLGLYIEIL QRKRLFVNAI HVVNNAPDDV RSKLKNLTSG DVDLRFFCCW
CQKLLVNEKS KEKLKNDVNA DFGYWYCDEC SQKQLNCIYC NEPCKGLTVV VSLKCGHRGH
FGCLREWFIE DENNECPGGC DYSVV
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