| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_53071 |
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| Symbol | |
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| ID | 4851594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 2245305 |
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| End bp | 2248112 |
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| Gene Length | 2808 bp |
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| Protein Length | 935 aa |
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| Translation table | |
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| GC content | 41% |
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| IMG OID | 640393302 |
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| Product | predicted protein |
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| Protein accession | XP_001386779 |
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| Protein GI | 126274971 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0581449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCCG ATTTTAGGTT CTCTAATCTC CTCGGAACAG TTTACAGACA GGGTAATCTT
GTTTTCACCG ACGATGGAAC AAAGCTCTTG TCCCCAGTAG GAAATAGAAT GTCTTGTTTT
GATCTCATTC ATAATAGATC CTTCACTTTC AACTACGAGC ACCGTAAAAA CATAGCGAGA
ATCGCCTTAA ACAAGCAAGG AACTCTTTTA TTATCGGTGG ATGAAGATGG CCGTGCCATT
CTAGTCAATT TTATCCTGAG GACGGTATTG CATCACTTCA ACTTCAAGGA AAGAGTGCTT
GATTTGCAGT TCAGCCCAGA TGGTCATTAC TTCGCCATTG CTTGTAATAG ATTTATTCAA
GTATGGAAAA CGCCTGATTT TACCGAAGAC AGACAGTTTG CTCCATTTGT CCGCCATCGT
ATCTATGCTG GCCATTACAG TGATGTCACT TCTGTTACTT GGTCCAGCGA CTCTCGTTTT
TTCATCAGTA CTTCAAAGGA TATGACTTCC AGAATTTTTT CGCTACAGTC TCTGGAAAAC
GATGTGGCAA TGACATTGGC CGGTCACAGA GACTACGTAG TAAAGGCATT CTTCAACAAG
AGTCAGGAAA TCATATATAC AATAAGTAAG GATGGTGCTT TGTTCACTTG GGAATACACA
GAAAAACCGG GTGACGACGG AAGTGAGGAA GATAGTGAAG ATGAAGAACA AGAGGACACA
CAGACAAACA ATAAGCCAAT GAGCTGGAGA ATTACGGCTA AGAACTTCTT TCATTCTGAC
GCCAAAGTCA AATGTGCAAC CTTCCACGCT GACTCTAACT TGTTAGTGGT TGGTTTCTAC
AACGGAGAGT TTAGATTATA CGAATTGCCT GATTTTAATC TTGTACAGCA ATTGAGCATG
GGTCAGAATG CCGTTGATAC AGTCAATATC AACAAGAGTG GTGAATGGCT TTCATTTGGT
TCGGCTAAAT TGGGTCAATT GTTAGTATAT GAATGGCAAT CCGAATCCTA CATTTTGAAG
CAACAGGGCC ATTTTGATTC AATGAATGCA CTTTGCTATT CTCCTGATGG ATCCAGAGTC
GTGACCGCTT CAGATGATGG TAAGATTAAG ATTTGGGATG TGATATCTGG TTTCTGTCTT
ATGACATTTA CAGAACACAC ATCATCAGTC ACCGATGTCA AGTTTGCAAA GAAGGGACAA
GTTTTATTCT CTTCGTCTTT GGATGGTACC GTTAGAGCTT GGGACTTGAT CAGATTCAGA
AATTTCAGAA CCTTCACCGC CACGGAACGT ATTCAATTCA ACTCTTTGGC TGTTGATCCT
AGCGGTGAAG TGGTCGTAGC TGGATCTCAA GACACTTTTG AAATCTATGT TTGGTCTGTT
CAAACCGCTC AATTGCTTGA ATCTTTGACT GGCCATGAGG GTCCAATTTC TTGTTTGACT
TTCGGTCAAG AAAACTCGGT TTTGGCATCA GCTTCCTGGG ATAAGACTAT TCGTATTTGG
AACATTTTTG GTCGTAGTCA GCAAGTTGAA CCAATTGAAA TTGAGAGCGA TGTTCTTTGT
TTGGCAATGA GACCAGATTG CAAAGAATTG TCTGTTTCCA CTTTGGACGG TCACATTGCT
GTTTACGATG TAGAAGATGC GAACCAGTTG CATTTAATAG ATGGGAAGAG AGATATCATT
GGTGGTAGAT ATTTGGAAGA TAGATTCACT GCCAAGAATG CTGCTCGATC TAAATATTTC
ACAACTATCA ACTATTCCTT TGATGGATTG ACCTTGGTTG CTGGTGGTAA TAACAACTCA
ATTTGCATGT ACGATGTCAG TAATGAGGTG TTGTTGAAGA GATTTACCGT TTCGCAGAAC
ATGACTCTTA ATGGTACTCA GCAAGTCTTG AACAGTAGCA AAATTACAGA TGGTGGAATA
TCCCTCGACT TAATTGATAG GGCCGGTGAA AACTCCGATG TTGAAGATAG ATTGGATAAT
TCTTTGCCAG GGTCTCATCG AGGAGACCCA AGTGTCAGAT CATACCGTTC CGAAATTCGC
GTGAACGCCA TTCAGTTTTC ACCGACTTCT TCTGCTTTCG CAGCTGCATC TACTGAAGGA
TTGCTAATCT ATTCTATTGA TAGCACGGTG ATTTTTGATC CATTCGATTT AGATGTGGAC
ATTACACCAG AGGCTACACT AGAGACTTTG GCTGATCAGG ATTTCCTCAC GTCTCTTGTT
ATGGCCTTCA GATTGAACGA AGAGTACTTG ATACAGAAAG TTTATGAAGC TATCCCATTA
CAAGATATCA AGTTGGTTTC TAGCGATTTG CCAATTGTCT ATGTTAATAG AATGCTTGCT
TTCATTGGAA ACACATTAAT AAAATACGAG AATCAGCACT TTGAGTACAA TTTACTTTGG
ATCAGGCTGA TCTTGTCTGC TCACGGAAAA TATATAAATG CACACAAGCA CGAATTTGTT
AGCAGCTTGA AGTTGATTCA AAGATTCTTG GCTAAGGTTG GTAAGGAAGT GGTAGCAGTT
GGAAAAAAGA ATGGCTACTT TTTGGAATAT TTACAAGTTT CGAAGGACTT GAACAATCAA
GTACAAGAGG AGGAGGGCGA AAGAATAGAT GAAGACGAAG AAAATGAACT GGATAATGAA
GCCATAATTG AAGATGAAGA CAATGAAGAA GAATCTGAAT GGTTTGGCCC TGGTGGAGAA
AAATCTACTA AGAGAATTGA GTATGGTTCT GAACTGGGCG ATAGTTCCGC TGAGGAAGAG
GAAGGCGACG ATGAAGATGA TGACTCTGAT GACAACATCG AGGTCTAA
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| Protein sequence | MKSDFRFSNL LGTVYRQGNL VFTDDGTKLL SPVGNRMSCF DLIHNRSFTF NYEHRKNIAR
IALNKQGTLL LSVDEDGRAI LVNFILRTVL HHFNFKERVL DLQFSPDGHY FAIACNRFIQ
VWKTPDFTED RQFAPFVRHR IYAGHYSDVT SVTWSSDSRF FISTSKDMTS RIFSLQSLEN
DVAMTLAGHR DYVVKAFFNK SQEIIYTISK DGALFTWEYT EKPGDDGSEE DSEDEEQEDT
QTNNKPMSWR ITAKNFFHSD AKVKCATFHA DSNLLVVGFY NGEFRLYELP DFNLVQQLSM
GQNAVDTVNI NKSGEWLSFG SAKLGQLLVY EWQSESYILK QQGHFDSMNA LCYSPDGSRV
VTASDDGKIK IWDVISGFCL MTFTEHTSSV TDVKFAKKGQ VLFSSSLDGT VRAWDLIRFR
NFRTFTATER IQFNSLAVDP SGEVVVAGSQ DTFEIYVWSV QTAQLLESLT GHEGPISCLT
FGQENSVLAS ASWDKTIRIW NIFGRSQQVE PIEIESDVLC LAMRPDCKEL SVSTLDGHIA
VYDVEDANQL HLIDGKRDII GGRYLEDRFT AKNAARSKYF TTINYSFDGL TLVAGGNNNS
ICMYDVSNEV LLKRFTVSQN MTLNGTQQVL NSSKITDGGI SLDLIDRAGE NSDVEDRLDN
SLPGSHRGDP SVRSYRSEIR VNAIQFSPTS SAFAAASTEG LLIYSIDSTV IFDPFDLDVD
ITPEATLETL ADQDFLTSLV MAFRLNEEYL IQKVYEAIPL QDIKLVSSDL PIVYVNRMLA
FIGNTLIKYE NQHFEYNLLW IRLILSAHGK YINAHKHEFV SSLKLIQRFL AKVGKEVVAV
GKKNGYFLEY LQVSKDLNNQ VQEEEGERID EDEENELDNE AIIEDEDNEE ESEWFGPGGE
KSTKRIEYGS ELGDSSAEEE EGDDEDDDSD DNIEV
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