Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_52783 |
Symbol | |
ID | 4851518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | + |
Start bp | 2039891 |
End bp | 2041126 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | |
GC content | 45% |
IMG OID | 640393226 |
Product | predicted protein |
Protein accession | XP_001387628 |
Protein GI | 126274728 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.423874 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCTCAT CCTCTAGCAT CTCCAGACGA AACTTGTCTT TTTTCTGGAA GATGTTGGCT CTCGATAAAC CCGAGTCCAA GGAGTCCGAA CGTCCGCTCT ACAACTGGGA CGAATCACCT TACGAAGATA TTAGAACACG TGCAGCGTTC ATAAGAGCCA AAGCCCTCTG TCCGGTCACC AAGAAGCCAG TCAACTTCGT TTGTCCATAT TCAGGAATTC CTACTCACCA TTCGAGAGAA GCCTGGGAAA GCGATACTGA ATACCACAAG AGAAAAACCT ACGAGTTGTT GAAGAAGGTC AACTTGTACG AGCACGATGT CAGATCTGGT AGAAAATTCG ACGAATTTGT ATTTCCCCTC GAACAAAATA ATGATTACAT GGTCAACTTG TCTAGTTGGG ATTCGTTCTT CTACACGAGA GATTTCGCTC CCATGAACAC AGAATTCAAC TTGGCTGCTG CCACTAAAGT ATTGACATAT CCCATGACAA TTGCGGCTAT TATTAACAAA TATTCACCCT ACGAACCACA GCCTAAGGGA CCAGTAACTG TAGAAGGTCT TCGTTCCTTG GCAGCTTTGA AGTATACTTT ATATCCTCCA TACACTAAAT CCACTGACGC TGTCACTTTC AAAGAAAGAC CCATGAGAAT TTTCATTCTC GGCGCTAAAA TGGAATCCAT GTTGCCTGGT TACGTATGGA AACAGTTTGG TTATCTTTTC CCAGAAACCA AGTTCGAAAT CCATTTGGTA GGCCCGGAAG CTTATTTTGA TAAGGAGACC AGATCGTTCG GCCCTACAAA TGAGCCTCAT GGCCGTGCCC TAGTCAAAAG ATTTGACGAG CAAATCACTC TTCACTACCA TACGAGATAC TTCCACGAGC TCTACGACAT GGGTGACTTG TTCCCATTCG ACCCATACTT GGATATTTTC TTTTTGTTCC ATCCCGGGTT CGGCACGGCT GACTCCATTT ACTGGGACAA AGCCATGAAG GGATTGCTAG AGTCCAAATG TCCCATCTAC GTCAGTGGGT ACCACGACAA GGACATGAAG CGAGAAATAC AGTGGTTGGA AAATCACCCC TTGCACGACG AAATGGATGT GTTGATGACT CAAACAGACA ACAAGTTTGC CTGTACCAAG ATCGACTTGG TGGACATCAA CCCCACGGAA ACATTTAACT CCAATAGTCA ATTATATGCA TTCAGAGGTA AGAGATACCA CGCCATTAAG ACCTAA
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Protein sequence | MGSSSSISRR NLSFFWKMLA LDKPESKESE RPLYNWDESP YEDIRTRAAF IRAKALCPVT KKPVNFVCPY SGIPTHHSRE AWESDTEYHK RKTYELLKKV NLYEHDVRSG RKFDEFVFPL EQNNDYMVNL SSWDSFFYTR DFAPMNTEFN LAAATKVLTY PMTIAAIINK YSPYEPQPKG PVTVEGLRSL AALKYTLYPP YTKSTDAVTF KERPMRIFIL GAKMESMLPG YVWKQFGYLF PETKFEIHLV GPEAYFDKET RSFGPTNEPH GRALVKRFDE QITLHYHTRY FHELYDMGDL FPFDPYLDIF FLFHPGFGTA DSIYWDKAMK GLLESKCPIY VSGYHDKDMK REIQWLENHP LHDEMDVLMT QTDNKFACTK IDLVDINPTE TFNSNSQLYA FRGKRYHAIK T
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