Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_52484 |
Symbol | FRE1.3 |
ID | 4851253 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 1318635 |
End bp | 1320953 |
Gene Length | 2319 bp |
Protein Length | 749 aa |
Translation table | |
GC content | 42% |
IMG OID | 640392961 |
Product | ferric reductase (FRE9 FRE5 FRE6 FRE4 FRE7) |
Protein accession | XP_001387899 |
Protein GI | 126274239 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4097] Predicted ferric reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.993633 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.277874 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATATCT GGGCCGTATA TACATCGCTA GTAATACTAG CAGTTGCTAC GCCTTTGCTT GTGATACCGG CCAAATTTCA GAACTCTTCT GTCAGAGCTA CCAAAGTAGT GCTATGTATC TGTTTCGTGA TATCGGCAAT GATAGCTCTT ACCCCTGAAG CCGCTGTAAA CGGAGCCCCA ATGCATAAGT ACGGCCAGGC CAGTATCGCC TTTTTAGGTT GCAACTACCA GATCTCTCTA ACAACGACAT TCTGCCCTGA GGGCATCGTT AGTCAGGAAT GCTACTGCAA GAACTCCAAT GCTTTAGCGA CTATTTCCCA TTGCTACAAG TATGGACATC CACAAGAAAT AAACTCTTTC TTGGGAATGT GCCAGCTGAT GTTCAACATA AGTCTCACAG AAAGCGAGTT TGAGGAGGCC CATGACAATT ACTTGAGGTC AGCCAAAAAC ATAAGTGAAA TTGTGGACTA CTCACCTTCC AAGCTAGTAG ATTTCCCCGT GAGATTAATA GACTCTGAGA TCGTTTTGTT CAGATCAGCT TATCAGAACT TCCTCGGAAA CTACGATGTT TCGGTTGATT ACGGCGCATA TGTGGTACTC TACTGGATAG TGGTATTCAC CATTGCAGCC ATCGGAAACT GGTCAAAAGT AATCTTTCCA GATCTATACA GAAACTTTCT CACTGGACCT TTTTCAAATT GGTTCAGAAG AACCATTTCG CTTCCAGCAA CAAGAGGAAA GTACAAGACA AACGAAAAGA AGTTTCTTGT CGTGCTTGAC ATGCTTGTGC CAACACGAGC CGAAACTATA ATTCTCATCA CTTTCGGCAG CATGTGCACT TACCTTCTTG TGTATAATAT CAACTACGTG GAGGGTGATC CTCTTTTTCA CGAGAAGAAG TATGCCATCC TTAGATATGT GGCTGTACGT GCCAGCATTT TGACAAGTCT GTTGATGCCT CTTCTAATTT TGTTTGGTGG TAGAAACAAC TTCTTGCAAT GGTACACTAG ATGGGACTAC TCGACGTTTA TTACTCTTCA CAGATGGCTC TCCCGGATAG TCTTCGTCAT GGTGATGATC CACGTTCTTT TCTACACCAA ATTGATTAAA GAACGTAACC CGGACAGAAT AAACGAGCCA TACATCAGAT GGGGTGCCTT AGCGACATGG TCTGGCATTC TCATTATGAT ACAGGGTTTG TTAGTGCTTA GAAGGAAATG GTACGAAGTA TTCCTTTTGG TTCATATAAT ATTGGCTGCC GTATTCATTT TTGGTGCGTG GCTTCATGTC AAAGATTTAT ACTGTGTTTG GTTCTACTAC TACACTTCCA TGCTATGGCT CTTTGACAGA ATAGTACGTG TTGGAAGACT CTTCTCGTTT GGCTTCCCAG AAGCACAGGT GCAACTAATA GCCAACGAGA CTTTGAAAGT AATTGTTCCA AAGCCTGACC ATTGGGAGGC TGTTCCAGGA GGGCATGTCT TTATTCATTT TCTCAGGTTT AGTTGCTTCT GGCAGTCTCA CCCATTCACG TATACTATAG ATTTGGATGA CCCGGCCAAT ATAGTCTTGT TCGTAAAAGT CAAGCAAGGT GTGACTTCCA GCTTGTACGA ATATCTTAAG AGCCATCCAG GAAAACTGAC TTCCATTAGA GTTGCAATTG AAGGCTCATA TGGCGAGAAG ACTCCAGCTA GTAGGTACGA TAGTGCCATT TTTGTGGCTG GAGGTAATGG AATACCAGGA ATTTATGCCG AAGTGTACGA GTTGGCCAAG AGAAGCAACT TCACTAAGCA AAACTTAAAA TTAACTTGGG TTATAAGGGA GTATAGATCT TTGCTTTGGT TTTATGATGA ATTGGTCTCA TTGAAGGGAA CTAATATCGA TACTACCATC TGCGTTACCA AACCGAACTC TCATGGCTAC CTAGAAGAAT ATGATGGCGT GACTCTGTCA AGGAATTCCA TTTACGCTGA AGAAATCAAT GAAAACGAAC AAGAAAATTC ACATAAGCCT CTTTTGTCTT CAAATACAAC AAGATACAAT ACTTTTGAAT CAAGAAACTT GACTGAGATG GGCAGCATGA GACCAGAAAT TATCTCGGCA ATCAAGACTG ATCTTTCCCA CATTCAATTC AGGGAAGGAA GACCCCACAT TGATACCCTC GTCAAGCAGG CAACCAAAGA GTCTCCAGGT TCTGCATGTT TTGTGACCTG TGGGCATCCG GTAATGGTAG ACGAATTACG GTCTGCCGTT GTAGAAAATA TTAATAATTC CGATAGAAAG AGGGTAGACT ACTTTGAGCA ATTACAGGTA TGGGCATAG
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Protein sequence | MYIWAVYTSL VILAVATPLL VIPAKFQNSS VRATKVVLCI CFVISAMIAL TPEAAVNGAP MHKYGQASIA FLGCNYQISL TTTFCPEGIV SQECYCKNSN ALATISHCYK YGHPQEINSF LGMCQLMFNI SLTESEFEEA HDNYLRSAKN ISEIVDYSPS KLVDFPVRLI DSEIVLFRSA YQNFLGNYDV SVDYGAYVVL YWIVVFTIAA IGNWSKVIFP DLYRNFLTGP FSNWFRRTIS LPATRGKYKT NEKKFLVVLD MLVPTRAETI ILITFGSMCT YLLVYNINYV EGDPLFHEKK YAILRYVAVR ASILTSLLMP LLILFGGRNN FLQWYTRWDY STFITLHRWL SRIVFVMVMI HVLFYTKLIK ERNPDRINEP YIRWGALATW SGILIMIQGL LVLRRKWYEV FLLVHIILAA VFIFGAWLHV KDLYCVWFYY YTSMLWLFDR IVRVGRLFSF GFPEAQVQLI ANETLKVIVP KPDHWEAVPG GHVFIHFLRF SCFWQSHPFT YTIDLDDPAN IVLFVKVKQG VTSSLYEYLK SHPGKLTSIR VAIEGSYGEK TPASRYDSAI FVAGGNGIPG IYAEVYELAK RSNFTKQNLK LTWVIREYRS LLWFYDELVS LKGTNIDTTI CVTKPNSHGY LEEYDGPLLS SNTTRYNTFE SRNLTEMGSM RPEIISAIKT DLSHIQFREG RPHIDTLVKQ ATKESPGSAC FVTCGHPVMV DELRSAVVEN INNSDRKRVD YFEQLQVWA
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