| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_51902 |
|---|
| Symbol | MMD1 |
|---|
| ID | 4851060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | + |
|---|
| Start bp | 849657 |
|---|
| End bp | 849986 |
|---|
| Gene Length | 330 bp |
|---|
| Protein Length | 109 aa |
|---|
| Translation table | |
|---|
| GC content | 45% |
|---|
| IMG OID | 640392768 |
|---|
| Product | maintenance of mitochondrial DNA |
|---|
| Protein accession | XP_001387392 |
|---|
| Protein GI | 126274046 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GGCTTTATCT ATGTATCAGG CCAGATTCCT TATACCCCAC AAAACCAGCC ATTGCCAGGT
AACCCTTCTA TTCAAGAACA AGCTGAGCAA GTGATCCAAA ATGTATCCAA CATCTTGGAA
GCCTCCAACT CCTCGTTGAA ACATGTCGTC AAGGCCAACA TCTTCTTGAC CGACATGAAG
GCTCAATTCG GTGAATTCAA CGCTGTCTAT GGTAAGTACT TCAACAACCA CAAGCCAGCC
AGATCTTGTG TCGCTGTCAA GGAATTGCCT TTGGGTGTTG CCTTGGAAAT GGAAGTTGTT
GCCATTGAAA AGGACGAGCC AAAGTTGTAG
|
|---|
| Protein sequence | GFIYVSGQIP YTPQNQPLPG NPSIQEQAEQ VIQNVSNILE ASNSSLKHVV KANIFLTDMK
AQFGEFNAVY GKYFNNHKPA RSCVAVKELP LGVALEMEVV AIEKDEPKL
|
|---|
| |